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  5. Transcript_contig_78754

Transcript_contig_78754 (78754)


Aliases : 78754

Description : Amino acid transporter, transmembrane domain [Interproscan].


Gene families : OG_01_0002404 (OrthoFinder) Phylogenetic Tree(s): OG0002404_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_78754
Cluster HCCA: Cluster_147

Target Alias Description ECC score Gene Family Method Actions
lcl|LHPG02000002.1_cds_PRW60216.1_4544 PRW60216 Putative sodium-coupled neutral amino acid transporter 6 0.01 OrthoFinder
lcl|LHPG02000014.1_cds_PRW39228.1_2544 PRW39228 Putative sodium-coupled neutral amino acid transporter 6 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
MF GO:0004497 monooxygenase activity IEP Enrichment
BP GO:0006352 DNA-templated transcription, initiation IEP Enrichment
MF GO:0008234 cysteine-type peptidase activity IEP Enrichment
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Enrichment
MF GO:0016714 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced pteridine as one donor, and incorporation of one atom of oxygen IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment
InterPro domains Description Start Stop
IPR013057 AA_transpt_TM 34 444
No external refs found!