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  5. Transcript_contig_78470

Transcript_contig_78470 (78470)


Aliases : 78470

Description : Transcription factor IIIC subunit Tfc1/Sfc1, triple barrel domain; Transcription factor IIIC subunit 5, HTH domain [Interproscan].


Gene families : OG_01_0006431 (OrthoFinder) Phylogenetic Tree(s): OG0006431_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_78470
Cluster HCCA: Cluster_255

Target Alias Description ECC score Gene Family Method Actions
Cre13.g576250 30784588 RNA biosynthesis.RNA polymerase III-dependent... 0.01 OrthoFinder
lcl|LHPG02000019.1_cds_PRW32690.1_4092 PRW32690 General transcription factor 3C polypeptide 5 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004371 glycerone kinase activity IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
CC GO:0005777 peroxisome IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0006066 alcohol metabolic process IEP Enrichment
BP GO:0006071 glycerol metabolic process IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
BP GO:0007031 peroxisome organization IEP Enrichment
BP GO:0019400 alditol metabolic process IEP Enrichment
BP GO:0019751 polyol metabolic process IEP Enrichment
CC GO:0030176 integral component of endoplasmic reticulum membrane IEP Enrichment
CC GO:0031227 intrinsic component of endoplasmic reticulum membrane IEP Enrichment
CC GO:0031300 intrinsic component of organelle membrane IEP Enrichment
CC GO:0031301 integral component of organelle membrane IEP Enrichment
CC GO:0042579 microbody IEP Enrichment
BP GO:0044262 cellular carbohydrate metabolic process IEP Enrichment
BP GO:1901615 organic hydroxy compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR041499 Tfc1/Sfc1_N 46 150
IPR019136 TF_IIIC_su-5_HTH 183 332
No external refs found!