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  5. Transcript_contig_78409

Transcript_contig_78409 (78409)


Aliases : 78409

Description : Amine oxidase [Interproscan].


Gene families : OG_01_0002494 (OrthoFinder) Phylogenetic Tree(s): OG0002494_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_78409
Cluster HCCA: Cluster_108

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000241.142 tig00000241_g21007.t1 Protoporphyrinogen oxidase, chloroplastic OS=Nicotiana tabacum 0.01 OrthoFinder
Cre09.g396300 30781023, PPX1 Coenzyme metabolism.tetrapyrrol... 0.04 OrthoFinder
Cz02g42010.t1 No alias Amine oxidase [Interproscan]. 0.04 OrthoFinder
OT_06G03400.1 No alias Amine oxidase [Interproscan]. 0.02 OrthoFinder
PTI_29G00180.1 No alias Amine oxidase [Interproscan]. 0.01 OrthoFinder
Sro834_g208740.1 Contig2061.g17676 Protoporphyrinogen oxidase 1, chloroplastic 0.04 OrthoFinder
TP23G00640.1 No alias Amine oxidase [Interproscan]. 0.03 OrthoFinder
Vocar.0008s0226.1 32897036 Amine oxidase [Interproscan]. 0.03 OrthoFinder
XM_002508120.1 MICPUN_60613, 60613 Protoporphyrinogen IX oxidase chloroplast precursor (HEMG) 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0004655 porphobilinogen synthase activity IEP Enrichment
MF GO:0004721 phosphoprotein phosphatase activity IEP Enrichment
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
BP GO:0006366 transcription by RNA polymerase II IEP Enrichment
BP GO:0006778 porphyrin-containing compound metabolic process IEP Enrichment
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Enrichment
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
MF GO:0010181 FMN binding IEP Enrichment
BP GO:0016311 dephosphorylation IEP Enrichment
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Enrichment
MF GO:0016791 phosphatase activity IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016831 carboxy-lyase activity IEP Enrichment
MF GO:0016835 carbon-oxygen lyase activity IEP Enrichment
MF GO:0016836 hydro-lyase activity IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
CC GO:0019867 outer membrane IEP Enrichment
BP GO:0033013 tetrapyrrole metabolic process IEP Enrichment
BP GO:0033014 tetrapyrrole biosynthetic process IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR002937 Amino_oxidase 89 552
No external refs found!