Transcript_contig_78199 (78199)


Aliases : 78199

Description : Hypothetical protein


Gene families : OG_01_0000113 (OrthoFinder) Phylogenetic Tree(s): OG0000113_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_78199
Cluster HCCA: Cluster_176

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020965.62 tig00020965_g16875.t1 No description available 0.02 OrthoFinder
Cre03.g212417 30788136 No description available 0.01 OrthoFinder
Cre10.g464133 30789990 No description available 0.01 OrthoFinder
EOD04871 No alias Hypothetical protein [Ensembl]. 0.01 OrthoFinder
EOD08514 No alias AP2/ERF domain [Interproscan]. 0.01 OrthoFinder
EOD21073 No alias Zinc finger, CW-type [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
CC GO:0005667 transcription regulator complex IEP Enrichment
CC GO:0005672 transcription factor TFIIA complex IEP Enrichment
BP GO:0006352 DNA-templated transcription, initiation IEP Enrichment
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Enrichment
MF GO:0008237 metallopeptidase activity IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016830 carbon-carbon lyase activity IEP Enrichment
MF GO:0016831 carboxy-lyase activity IEP Enrichment
MF GO:0016840 carbon-nitrogen lyase activity IEP Enrichment
MF GO:0016843 amine-lyase activity IEP Enrichment
MF GO:0016844 strictosidine synthase activity IEP Enrichment
MF GO:0030170 pyridoxal phosphate binding IEP Enrichment
MF GO:0033218 amide binding IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
MF GO:0070279 vitamin B6 binding IEP Enrichment
CC GO:0090575 RNA polymerase II transcription regulator complex IEP Enrichment
MF GO:0120227 acyl-CoA binding IEP Enrichment
MF GO:1901567 fatty acid derivative binding IEP Enrichment
MF GO:1901681 sulfur compound binding IEP Enrichment

No InterPro domains available for this sequence

No external refs found!