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  5. Transcript_contig_78078

Transcript_contig_78078 (78078)


Aliases : 78078

Description : Bestrophin/UPF0187 [Interproscan].


Gene families : OG_01_0000064 (OrthoFinder) Phylogenetic Tree(s): OG0000064_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_78078
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
Cre16.g662600 30777389 Solute transport.channels.VCCN chloride anion channel 0.01 OrthoFinder
Sro712_g191410.1 Contig2484.g20346 UPF0187 protein 0.01 OrthoFinder
lcl|LHPG02000017.1_cds_PRW33245.1_3628 PRW33245 UPF0187 chloroplastic 0.02 OrthoFinder
lcl|LHPG02000019.1_cds_PRW32665.1_4091 PRW32665 UPF0187 chloroplastic 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004674 protein serine/threonine kinase activity IEP Enrichment
MF GO:0004683 calmodulin-dependent protein kinase activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
MF GO:0005516 calmodulin binding IEP Enrichment
InterPro domains Description Start Stop
IPR021134 Bestrophin/UPF0187 104 280
No external refs found!