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Transcript_contig_78050 (78050)


Aliases : 78050

Description : Starch synthase, catalytic domain; Glycosyl transferase, family 1; Carbohydrate binding module family 25 [Interproscan].


Gene families : OG_01_0000642 (OrthoFinder) Phylogenetic Tree(s): OG0000642_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_78050
Cluster HCCA: Cluster_129

Target Alias Description ECC score Gene Family Method Actions
Cre06.g282000 30779862, SSS3 Carbohydrate metabolism.starch... 0.02 OrthoFinder
Cz15g15130.t1 No alias Starch synthase, catalytic domain; Carbohydrate binding... 0.02 OrthoFinder
Dusal.0196s00013.1 33200613 Glycosyl transferase, family 1; Carbohydrate binding... 0.02 OrthoFinder
OT_13G01200.1 No alias Glycosyl transferase, family 1; Starch synthase,... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:2001070 starch binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0009116 nucleoside metabolic process IEP Enrichment
BP GO:1901657 glycosyl compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR001296 Glyco_trans_1 986 1105
IPR005085 CBM25 441 563
IPR005085 CBM25 641 725
IPR005085 CBM25 262 351
IPR013534 Starch_synth_cat_dom 736 923
No external refs found!