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  5. Cpa|evm.model.tig00000842.6

Cpa|evm.model.tig00000842.6 (tig00000842_g4825.t1)


Aliases : tig00000842_g4825.t1

Description : ATP-dependent Clp protease proteolytic subunit OS=Oltmannsiellopsis viridis


Gene families : OG_01_0000040 (OrthoFinder) Phylogenetic Tree(s): OG0000040_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000842.6
Cluster HCCA: Cluster_163

Target Alias Description ECC score Gene Family Method Actions
Cre03.g204350 30787499, CLPR4 Protein degradation.peptidase families.serine-type... 0.02 OrthoFinder
Cre06.g299650 30779921, CLPR6 ATP-dependent Clp protease proteolytic subunit 6,... 0.03 OrthoFinder
Cre07.g331500 30774567, CLPR3 Protein degradation.peptidase families.serine-type... 0.02 OrthoFinder
Cre12.g486100 30791972, CLPP5 Protein degradation.peptidase families.serine-type... 0.02 OrthoFinder
Cre12.g500950 30792003, CLPP4 Protein degradation.peptidase families.serine-type... 0.01 OrthoFinder
Cre16.g682900 30778138, CLPR2 Protein degradation.peptidase families.serine-type... 0.03 OrthoFinder
EOD29710 No alias Putative endopeptidase Clp [Ensembl]. 0.01 OrthoFinder
OT_17G01480.1 No alias Clp protease proteolytic subunit... 0.01 OrthoFinder
Vocar.0001s0268.1 32885797 Clp protease proteolytic subunit... 0.01 OrthoFinder
Vocar.0004s0241.1 32890012 Clp protease proteolytic subunit... 0.01 OrthoFinder
Vocar.0011s0141.1 32895480 Clp protease proteolytic subunit... 0.02 OrthoFinder
Vocar.0018s0103.1 32898503 Clp protease proteolytic subunit... 0.02 OrthoFinder
XM_003054761.1 MicpuC2_12936, 12936 Clp protease proteolytic subunit... 0.02 OrthoFinder
lcl|LHPG02000012.1_cds_PRW44960.1_1979 PRW44960 Protease complex subunit 3 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000221 vacuolar proton-transporting V-type ATPase, V1 domain IEP Enrichment
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
MF GO:0004832 valine-tRNA ligase activity IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006438 valyl-tRNA aminoacylation IEP Enrichment
BP GO:0006479 protein methylation IEP Enrichment
BP GO:0006480 N-terminal protein amino acid methylation IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
BP GO:0008213 protein alkylation IEP Enrichment
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
MF GO:0019829 ATPase-coupled cation transmembrane transporter activity IEP Enrichment
MF GO:0030170 pyridoxal phosphate binding IEP Enrichment
BP GO:0031365 N-terminal protein amino acid modification IEP Enrichment
BP GO:0032259 methylation IEP Enrichment
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Enrichment
CC GO:0033180 proton-transporting V-type ATPase, V1 domain IEP Enrichment
MF GO:0042625 ATPase-coupled ion transmembrane transporter activity IEP Enrichment
BP GO:0043414 macromolecule methylation IEP Enrichment
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Enrichment
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP Enrichment
MF GO:0070279 vitamin B6 binding IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
InterPro domains Description Start Stop
IPR023562 ClpP/TepA 115 289
No external refs found!