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  5. Cpa|evm.model.tig00000842.3

Cpa|evm.model.tig00000842.3 (tig00000842_g4822.t1)


Aliases : tig00000842_g4822.t1

Description : Photosynthesis.photophosphorylation.photosystem I.PS-I complex.component PsaL


Gene families : OG_01_0004527 (OrthoFinder) Phylogenetic Tree(s): OG0004527_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000842.3
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
Cre12.g486300 30793364, PSAL Photosynthesis.photophosphorylation.photosystem I.PS-I... 0.03 OrthoFinder
Cz02g18180.t1 No alias Photosystem I PsaL, reaction centre subunit XI [Interproscan]. 0.04 OrthoFinder
OT_02G00580.1 No alias Photosystem I PsaL, reaction centre subunit XI [Interproscan]. 0.02 OrthoFinder
Sro51_chlor_g030640.1 PsaL PsaL 0.01 OrthoFinder
Transcript_contig_58759 58759 Photosystem I PsaL, reaction centre subunit XI [Interproscan]. 0.02 OrthoFinder
Vocar.0016s0158.1 32897915 Photosystem I PsaL, reaction centre subunit XI [Interproscan]. 0.04 OrthoFinder
XM_002504208.1 MICPUN_95054, 95054 Photosystem I subunit XI, chloroplast precursor (PSAL) 0.02 OrthoFinder
lcl|BLLF01000756.1_cds_GFH14697.1_9174 HaLaN_10804, GFH14697 Hypothetical protein psal 0.03 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0009522 photosystem I IEA Interproscan
CC GO:0009538 photosystem I reaction center IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
CC GO:0009507 chloroplast IEP Enrichment
CC GO:0009523 photosystem II IEP Enrichment
CC GO:0009536 plastid IEP Enrichment
CC GO:0009654 photosystem II oxygen evolving complex IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0010207 photosystem II assembly IEP Enrichment
MF GO:0010242 oxygen evolving activity IEP Enrichment
BP GO:0015979 photosynthesis IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
CC GO:0019898 extrinsic component of membrane IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
CC GO:0030076 light-harvesting complex IEP Enrichment
CC GO:0030089 phycobilisome IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
CC GO:1990204 oxidoreductase complex IEP Enrichment
InterPro domains Description Start Stop
IPR003757 PSI_PsaL 81 174
No external refs found!