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Aliases : 69154
Description : Tetratricopeptide repeat [Interproscan].
Gene families : OG_01_0000105 (OrthoFinder) Phylogenetic Tree(s): OG0000105_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Transcript_contig_69154 | |
| Cluster | HCCA: Cluster_122 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00000194.44 | tig00000194_g14772.t1 | No description available | 0.02 | OrthoFinder | |
| Cpa|evm.model.tig00001286.6 | tig00001286_g8022.t1 | Hsp70-Hsp90 organizing protein OS=Triticum aestivum | 0.01 | OrthoFinder | |
| Dusal.0549s00003.1 | 33192514 | Tetratricopeptide repeat 2; Tetratricopeptide repeat... | 0.02 | OrthoFinder | |
| Sro1140_g245520.1 | Contig821.g9116 | Hypothetical protein | 0.01 | OrthoFinder | |
| Sro1795_g298050.1 | Contig2340.g19260 | Hypothetical protein | 0.01 | OrthoFinder | |
| Sro741_g195710.1 | Contig2851.g22872 | Stress-induced-phosphoprotein 1 | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEP | Enrichment |
| MF | GO:0004518 | nuclease activity | IEP | Enrichment |
| MF | GO:0004519 | endonuclease activity | IEP | Enrichment |
| MF | GO:0004521 | endoribonuclease activity | IEP | Enrichment |
| MF | GO:0004540 | ribonuclease activity | IEP | Enrichment |
| MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | Enrichment |
| MF | GO:0004559 | alpha-mannosidase activity | IEP | Enrichment |
| MF | GO:0004571 | mannosyl-oligosaccharide 1,2-alpha-mannosidase activity | IEP | Enrichment |
| MF | GO:0005509 | calcium ion binding | IEP | Enrichment |
| CC | GO:0005575 | cellular_component | IEP | Enrichment |
| BP | GO:0005975 | carbohydrate metabolic process | IEP | Enrichment |
| BP | GO:0006486 | protein glycosylation | IEP | Enrichment |
| MF | GO:0015923 | mannosidase activity | IEP | Enrichment |
| MF | GO:0015924 | mannosyl-oligosaccharide mannosidase activity | IEP | Enrichment |
| CC | GO:0016020 | membrane | IEP | Enrichment |
| CC | GO:0016021 | integral component of membrane | IEP | Enrichment |
| MF | GO:0016787 | hydrolase activity | IEP | Enrichment |
| MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | Enrichment |
| MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | Enrichment |
| MF | GO:0016810 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | IEP | Enrichment |
| MF | GO:0016892 | endoribonuclease activity, producing 3'-phosphomonoesters | IEP | Enrichment |
| MF | GO:0016894 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters | IEP | Enrichment |
| CC | GO:0031224 | intrinsic component of membrane | IEP | Enrichment |
| MF | GO:0033897 | ribonuclease T2 activity | IEP | Enrichment |
| BP | GO:0043413 | macromolecule glycosylation | IEP | Enrichment |
| BP | GO:0070085 | glycosylation | IEP | Enrichment |
| CC | GO:0110165 | cellular anatomical entity | IEP | Enrichment |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR019734 | TPR_repeat | 14 | 40 |
| No external refs found! |