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  5. Transcript_contig_68442

Transcript_contig_68442 (68442)


Aliases : 68442

Description : Ubiquitin-conjugating enzyme E2 [Interproscan].


Gene families : OG_01_0000550 (OrthoFinder) Phylogenetic Tree(s): OG0000550_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_68442
Cluster HCCA: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
EOD07617 No alias Hypothetical protein [Ensembl]. 0.01 OrthoFinder
EOD17738 No alias Ubiquitin-conjugating enzyme E2 [Interproscan]. 0.02 OrthoFinder
SymbC1.scaffold3678.5 3678.5 Hypothetical protein 0.01 OrthoFinder
Vocar.0025s0144.1 32898301 Ubiquitin-conjugating enzyme E2 [Interproscan]. 0.01 OrthoFinder
XM_003064712.1 MicpuC2_37198, 37198 Ubiquitin-conjugating enzyme E2 [Interproscan]. 0.01 OrthoFinder
lcl|BLLF01001099.1_cds_GFH17118.1_11595 HaLaN_13678, GFH17118 Ubiquitin_conjugat_2 domain-containing protein 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0005507 copper ion binding IEP Enrichment
CC GO:0005789 endoplasmic reticulum membrane IEP Enrichment
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Enrichment
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP Enrichment
MF GO:0016758 hexosyltransferase activity IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016830 carbon-carbon lyase activity IEP Enrichment
MF GO:0016831 carboxy-lyase activity IEP Enrichment
MF GO:0016840 carbon-nitrogen lyase activity IEP Enrichment
MF GO:0016843 amine-lyase activity IEP Enrichment
MF GO:0016844 strictosidine synthase activity IEP Enrichment
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Enrichment
MF GO:0016972 thiol oxidase activity IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
MF GO:0030170 pyridoxal phosphate binding IEP Enrichment
CC GO:0031090 organelle membrane IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
MF GO:0070279 vitamin B6 binding IEP Enrichment
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 23 177
No external refs found!