- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : 68153
Description : Zinc finger, C3HC4 type (RING finger) [Interproscan].
Gene families : OG_01_0000209 (OrthoFinder) Phylogenetic Tree(s): OG0000209_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Transcript_contig_68153 | |
| Cluster | HCCA: Cluster_37 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00000093.105 | tig00000093_g3534.t1 | Protein degradation.peptidase families.serine-type... | 0.02 | OrthoFinder | |
| Cre05.g247500 | 30783134 | No description available | 0.02 | OrthoFinder | |
| SymbC1.scaffold616.4 | 616.4 | Zinc finger, C3HC4 type (RING finger) [Interproscan]. | 0.01 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003824 | catalytic activity | IEP | Enrichment |
| MF | GO:0004497 | monooxygenase activity | IEP | Enrichment |
| MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | Enrichment |
| BP | GO:0006820 | anion transport | IEP | Enrichment |
| BP | GO:0006835 | dicarboxylic acid transport | IEP | Enrichment |
| MF | GO:0008483 | transaminase activity | IEP | Enrichment |
| MF | GO:0010277 | chlorophyllide a oxygenase [overall] activity | IEP | Enrichment |
| BP | GO:0015711 | organic anion transport | IEP | Enrichment |
| BP | GO:0015740 | C4-dicarboxylate transport | IEP | Enrichment |
| BP | GO:0015743 | malate transport | IEP | Enrichment |
| BP | GO:0015849 | organic acid transport | IEP | Enrichment |
| MF | GO:0016491 | oxidoreductase activity | IEP | Enrichment |
| MF | GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors | IEP | Enrichment |
| MF | GO:0016701 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen | IEP | Enrichment |
| MF | GO:0016703 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) | IEP | Enrichment |
| MF | GO:0016769 | transferase activity, transferring nitrogenous groups | IEP | Enrichment |
| MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | Enrichment |
| MF | GO:0019842 | vitamin binding | IEP | Enrichment |
| MF | GO:0030170 | pyridoxal phosphate binding | IEP | Enrichment |
| BP | GO:0046942 | carboxylic acid transport | IEP | Enrichment |
| MF | GO:0050660 | flavin adenine dinucleotide binding | IEP | Enrichment |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | Enrichment |
| MF | GO:0051537 | 2 iron, 2 sulfur cluster binding | IEP | Enrichment |
| MF | GO:0051540 | metal cluster binding | IEP | Enrichment |
| BP | GO:0055114 | obsolete oxidation-reduction process | IEP | Enrichment |
| MF | GO:0070279 | vitamin B6 binding | IEP | Enrichment |
No InterPro domains available for this sequence
| No external refs found! |