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  5. Cpa|evm.model.tig00000826.20

Cpa|evm.model.tig00000826.20 (tig00000826_g4588.t1)


Aliases : tig00000826_g4588.t1

Description : DNA repair protein RAD5B OS=Arabidopsis thaliana


Gene families : OG_01_0003332 (OrthoFinder) Phylogenetic Tree(s): OG0003332_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000826.20
Cluster HCCA: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
lcl|LHPG02000015.1_cds_PRW34024.1_2921 PRW34024 Helicase-like transcription factor 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004325 ferrochelatase activity IEP Enrichment
MF GO:0004601 peroxidase activity IEP Enrichment
MF GO:0005381 iron ion transmembrane transporter activity IEP Enrichment
BP GO:0006979 response to oxidative stress IEP Enrichment
CC GO:0009521 photosystem IEP Enrichment
CC GO:0009522 photosystem I IEP Enrichment
MF GO:0010181 FMN binding IEP Enrichment
BP GO:0015979 photosynthesis IEP Enrichment
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Enrichment
BP GO:0030001 metal ion transport IEP Enrichment
CC GO:0030076 light-harvesting complex IEP Enrichment
CC GO:0030089 phycobilisome IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
CC GO:0033573 high-affinity iron permease complex IEP Enrichment
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
CC GO:0098797 plasma membrane protein complex IEP Enrichment
CC GO:1902495 transmembrane transporter complex IEP Enrichment
CC GO:1905862 ferroxidase complex IEP Enrichment
CC GO:1990204 oxidoreductase complex IEP Enrichment
CC GO:1990351 transporter complex IEP Enrichment
InterPro domains Description Start Stop
IPR000330 SNF2_N 291 473
IPR001650 Helicase_C 600 704
No external refs found!