Transcript_contig_67534 (67534)


Aliases : 67534

Description : SANT/Myb domain; MYB-CC type transcription factor, LHEQLE-containing domain [Interproscan].


Gene families : OG_01_0000283 (OrthoFinder) Phylogenetic Tree(s): OG0000283_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_67534
Cluster HCCA: Cluster_243

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000076.75 tig00000076_g2376.t1 No description available 0.01 OrthoFinder
Cz02g26120.t1 No alias MYB-CC type transcription factor, LHEQLE-containing... 0.01 OrthoFinder
Cz11g17160.t1 No alias Hypothetical protein 0.01 OrthoFinder
OT_16G01420.1 No alias SANT/Myb domain; Signal transduction response regulator,... 0.01 OrthoFinder
XM_002503954.1 MICPUN_60184, 60184 G2-like myb family transcription factor 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000228 nuclear chromosome IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0004843 thiol-dependent deubiquitinase IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005643 nuclear pore IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
BP GO:0006338 chromatin remodeling IEP Enrichment
BP GO:0006405 RNA export from nucleus IEP Enrichment
BP GO:0006406 mRNA export from nucleus IEP Enrichment
BP GO:0006813 potassium ion transport IEP Enrichment
BP GO:0006913 nucleocytoplasmic transport IEP Enrichment
MF GO:0008242 omega peptidase activity IEP Enrichment
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP Enrichment
BP GO:0015931 nucleobase-containing compound transport IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
BP GO:0016973 poly(A)+ mRNA export from nucleus IEP Enrichment
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Enrichment
BP GO:0050657 nucleic acid transport IEP Enrichment
BP GO:0050658 RNA transport IEP Enrichment
BP GO:0051028 mRNA transport IEP Enrichment
BP GO:0051168 nuclear export IEP Enrichment
BP GO:0051169 nuclear transport IEP Enrichment
BP GO:0051236 establishment of RNA localization IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0101005 deubiquitinase activity IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
MF GO:1990380 Lys48-specific deubiquitinase activity IEP Enrichment
InterPro domains Description Start Stop
IPR001005 SANT/Myb 219 269
IPR025756 Myb_CC_LHEQLE 359 402
No external refs found!