Transcript_contig_67477 (67477)

Aliases : 67477

Description : Histidine kinase/HSP90-like ATPase; PAS domain; SBP domain; Signal transduction histidine kinase, dimerisation/phosphoacceptor domain [Interproscan].

Gene families : OG_01_0000006 (OrthoFinder) Phylogenetic Tree(s): OG0000006_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Transcript_contig_67477
Cluster	HCCA: Cluster_189

Target	Alias	Description	ECC score	Gene Family Method
Dusal.0675s00001.1	33202443	Histidine kinase/HSP90-like ATPase [Interproscan].	0.01	OrthoFinder
EOD18760	No alias	Putative two component response regulator [Ensembl].	0.01	OrthoFinder
PTI_07G02160.1	No alias	Signal transduction response regulator, receiver domain;...	0.01	OrthoFinder
Sro1169_g248620.1	Contig2988.g23734	Respiration control sensor protein ArcB	0.02	OrthoFinder
Sro287_g108630.1	Contig252.g3104	Sensor protein kinase WalK (Fragment)	0.01	OrthoFinder
TP03G08180.1	No alias	Signal transduction response regulator, receiver domain...	0.01	OrthoFinder
lcl\|BLLF01000788.1_cds_GFH14961.1_9438	HaLaN_11105, GFH14961	Signal transduction histidine kinase,...	0.02	OrthoFinder
lcl\|BLLF01001425.1_cds_GFH19214.1_13691	HaLaN_16126, GFH19214	Signal transduction histidine kinase,...	0.02	OrthoFinder
lcl\|BLLF01002094.1_cds_GFH22668.1_17145	HaLaN_20168, GFH22668	Signal transduction response regulator, receiver domain...	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000155	phosphorelay sensor kinase activity	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	None	Extended
MF	GO:0004673	protein histidine kinase activity	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0007165	signal transduction	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016301	kinase activity	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
MF	GO:0016775	phosphotransferase activity, nitrogenous group as acceptor	None	Extended
CC	GO:0018995	host cellular component	None	Extended
CC	GO:0033643	host cell part	None	Extended
CC	GO:0033646	host intracellular part	None	Extended
CC	GO:0033647	host intracellular organelle	None	Extended
CC	GO:0033648	host intracellular membrane-bounded organelle	None	Extended
CC	GO:0042025	host cell nucleus	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:0140299	small molecule sensor activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000030	mannosyltransferase activity	IEP	Enrichment
MF	GO:0004843	thiol-dependent deubiquitinase	IEP	Enrichment
MF	GO:0005215	transporter activity	IEP	Enrichment
BP	GO:0006464	cellular protein modification process	IEP	Enrichment
BP	GO:0006508	proteolysis	IEP	Enrichment
MF	GO:0008233	peptidase activity	IEP	Enrichment
MF	GO:0008234	cysteine-type peptidase activity	IEP	Enrichment
MF	GO:0008242	omega peptidase activity	IEP	Enrichment
MF	GO:0015095	magnesium ion transmembrane transporter activity	IEP	Enrichment
BP	GO:0015693	magnesium ion transport	IEP	Enrichment
CC	GO:0016021	integral component of membrane	IEP	Enrichment
BP	GO:0016579	protein deubiquitination	IEP	Enrichment
MF	GO:0016758	hexosyltransferase activity	IEP	Enrichment
MF	GO:0019783	ubiquitin-like protein-specific protease activity	IEP	Enrichment
MF	GO:0022857	transmembrane transporter activity	IEP	Enrichment
BP	GO:0030001	metal ion transport	IEP	Enrichment
CC	GO:0030176	integral component of endoplasmic reticulum membrane	IEP	Enrichment
CC	GO:0031224	intrinsic component of membrane	IEP	Enrichment
CC	GO:0031227	intrinsic component of endoplasmic reticulum membrane	IEP	Enrichment
CC	GO:0031300	intrinsic component of organelle membrane	IEP	Enrichment
CC	GO:0031301	integral component of organelle membrane	IEP	Enrichment
BP	GO:0036211	protein modification process	IEP	Enrichment
MF	GO:0046873	metal ion transmembrane transporter activity	IEP	Enrichment
BP	GO:0070646	protein modification by small protein removal	IEP	Enrichment
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	Enrichment
MF	GO:0101005	deubiquitinase activity	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR003661	HisK_dim/P	543	606
IPR000014	PAS	146	175
IPR004333	SBP_dom	1145	1217
IPR003594	HATPase_C	655	794
IPR000014	PAS	287	393
IPR000014	PAS	423	518

External Links

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Transcript_contig_67477 (67477)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation