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  5. Transcript_contig_6507

Transcript_contig_6507 (6507)


Aliases : 6507

Description : Hypothetical protein


Gene families : OG_01_0000034 (OrthoFinder) Phylogenetic Tree(s): OG0000034_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_6507
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
TP18G02100.1 No alias Lysine methyltransferase [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000011.1_cds_PRW45633.1_1275 PRW45633 Lysine methyltransferase [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000012.1_cds_PRW45241.1_1878 PRW45241 Lysine methyltransferase [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000213 tRNA-intron endonuclease activity IEP Enrichment
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP Enrichment
MF GO:0004519 endonuclease activity IEP Enrichment
MF GO:0004521 endoribonuclease activity IEP Enrichment
MF GO:0004540 ribonuclease activity IEP Enrichment
MF GO:0004549 tRNA-specific ribonuclease activity IEP Enrichment
CC GO:0005576 extracellular region IEP Enrichment
BP GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
MF GO:0010181 FMN binding IEP Enrichment
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Enrichment
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Enrichment
MF GO:0016977 chitosanase activity IEP Enrichment
CC GO:0030684 preribosome IEP Enrichment
CC GO:0030688 preribosome, small subunit precursor IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment

No InterPro domains available for this sequence

No external refs found!