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  5. Transcript_contig_645

Transcript_contig_645 (645)


Aliases : 645

Description : CRC domain [Interproscan].


Gene families : OG_01_0000428 (OrthoFinder) Phylogenetic Tree(s): OG0000428_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_645
Cluster HCCA: Cluster_108

Target Alias Description ECC score Gene Family Method Actions
Transcript_contig_54569 54569 Hypothetical protein 0.01 OrthoFinder
XM_003060765.1 MicpuC2_60407, 60407 Tso1-like transcription factor 0.02 OrthoFinder
lcl|BLLF01002044.1_cds_GFH22454.1_16931 HaLaN_19924, GFH22454 CRC domain-containing protein 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000030 mannosyltransferase activity IEP Enrichment
BP GO:0006353 DNA-templated transcription, termination IEP Enrichment
MF GO:0016757 glycosyltransferase activity IEP Enrichment
MF GO:0016758 hexosyltransferase activity IEP Enrichment
CC GO:0030176 integral component of endoplasmic reticulum membrane IEP Enrichment
MF GO:0030246 carbohydrate binding IEP Enrichment
MF GO:0030247 polysaccharide binding IEP Enrichment
CC GO:0031227 intrinsic component of endoplasmic reticulum membrane IEP Enrichment
CC GO:0031300 intrinsic component of organelle membrane IEP Enrichment
CC GO:0031301 integral component of organelle membrane IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
MF GO:2001070 starch binding IEP Enrichment
InterPro domains Description Start Stop
IPR005172 CRC 146 181
No external refs found!