Transcript_contig_6378 (6378)


Aliases : 6378

Description : Nucleotide-sugar transporter [Interproscan].


Gene families : OG_01_0000279 (OrthoFinder) Phylogenetic Tree(s): OG0000279_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_6378
Cluster HCCA: Cluster_194

Target Alias Description ECC score Gene Family Method Actions
EOD11700 No alias Nucleotide-sugar transporter [Interproscan]. 0.01 OrthoFinder
EOD25619 No alias Nucleotide-sugar transporter [Interproscan]. 0.01 OrthoFinder
EOD32791 No alias Nucleotide-sugar transporter [Interproscan]. 0.01 OrthoFinder
EOD36687 No alias Nucleotide-sugar transporter [Interproscan]. 0.01 OrthoFinder
EOD36755 No alias Nucleotide-sugar transporter [Interproscan]. 0.01 OrthoFinder
EOD37980 No alias Nucleotide-sugar transporter [Interproscan]. 0.01 OrthoFinder
PTI_19G01450.1 No alias Nucleotide-sugar transporter [Interproscan]. 0.03 OrthoFinder
TP01G09010.1 No alias Nucleotide-sugar transporter [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEA Interproscan
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0006820 anion transport IEP Enrichment
MF GO:0008509 anion transmembrane transporter activity IEP Enrichment
MF GO:0015098 molybdate ion transmembrane transporter activity IEP Enrichment
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Enrichment
MF GO:0015297 antiporter activity IEP Enrichment
BP GO:0015689 molybdate ion transport IEP Enrichment
BP GO:0015698 inorganic anion transport IEP Enrichment
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
InterPro domains Description Start Stop
IPR007271 Nuc_sug_transpt 132 469
No external refs found!