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  5. Cpa|evm.model.tig00000808.15

Cpa|evm.model.tig00000808.15 (tig00000808_g4401.t1)


Aliases : tig00000808_g4401.t1

Description : Chromatin organisation.histone chaperone activities.CAF1 histone chaperone complex.CAF1c/MSI component


Gene families : OG_01_0003117 (OrthoFinder) Phylogenetic Tree(s): OG0003117_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000808.15
Cluster HCCA: Cluster_144

Target Alias Description ECC score Gene Family Method Actions
Cz05g15140.t1 No alias WD40 repeat; Histone-binding protein RBBP4, N-terminal... 0.02 OrthoFinder
Sro1_g000700.1 Contig3007.g23985 Probable histone-binding protein lin-53 0.02 OrthoFinder
lcl|VRMN01000008.1_cds_KAA8492986.1_2722 KAA8492986 Histone-binding protein RBBP4 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005694 chromosome IEP Enrichment
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
MF GO:0015078 proton transmembrane transporter activity IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Enrichment
CC GO:0033180 proton-transporting V-type ATPase, V1 domain IEP Enrichment
BP GO:0034220 ion transmembrane transport IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
BP GO:0098655 cation transmembrane transport IEP Enrichment
BP GO:0098660 inorganic ion transmembrane transport IEP Enrichment
BP GO:0098662 inorganic cation transmembrane transport IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
BP GO:1902600 proton transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR001680 WD40_repeat 223 260
IPR001680 WD40_repeat 357 394
IPR001680 WD40_repeat 298 336
IPR022052 Histone-bd_RBBP4_N 21 89
No external refs found!