Transcript_contig_62265 (62265)

Aliases : 62265

Description : DNA helicase Pif1-like [Interproscan].

Gene families : OG_01_0001142 (OrthoFinder) Phylogenetic Tree(s): OG0001142_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Transcript_contig_62265
Cluster	HCCA: Cluster_230

Target	Alias	Description	ECC score	Gene Family Method	Actions
Cre12.g551550	30792623	No description available	0.02	OrthoFinder
EOD22903	No alias	Hypothetical protein [Ensembl].	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
BP	GO:0000723	telomere maintenance	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003678	DNA helicase activity	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004386	helicase activity	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006281	DNA repair	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006974	cellular response to DNA damage stimulus	None	Extended
BP	GO:0006996	organelle organization	None	Extended
MF	GO:0008094	ATPase, acting on DNA	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016887	ATPase	None	Extended
BP	GO:0032200	telomere organization	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0042592	homeostatic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051276	chromosome organization	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0060249	anatomical structure homeostasis	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0140097	catalytic activity, acting on DNA	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0000062	fatty-acyl-CoA binding	IEP	Enrichment
CC	GO:0000145	exocyst	IEP	Enrichment
CC	GO:0000159	protein phosphatase type 2A complex	IEP	Enrichment
CC	GO:0000444	MIS12/MIND type complex	IEP	Enrichment
CC	GO:0000808	origin recognition complex	IEP	Enrichment
CC	GO:0000818	nuclear MIS12/MIND complex	IEP	Enrichment
MF	GO:0003677	DNA binding	IEP	Enrichment
MF	GO:0003887	DNA-directed DNA polymerase activity	IEP	Enrichment
MF	GO:0004497	monooxygenase activity	IEP	Enrichment
MF	GO:0004668	protein-arginine deiminase activity	IEP	Enrichment
CC	GO:0005963	magnesium-dependent protein serine/threonine phosphatase complex	IEP	Enrichment
BP	GO:0006260	DNA replication	IEP	Enrichment
BP	GO:0006302	double-strand break repair	IEP	Enrichment
BP	GO:0006303	double-strand break repair via nonhomologous end joining	IEP	Enrichment
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEP	Enrichment
BP	GO:0006576	cellular biogenic amine metabolic process	IEP	Enrichment
BP	GO:0006595	polyamine metabolic process	IEP	Enrichment
BP	GO:0006596	polyamine biosynthetic process	IEP	Enrichment
BP	GO:0006629	lipid metabolic process	IEP	Enrichment
BP	GO:0006887	exocytosis	IEP	Enrichment
BP	GO:0007165	signal transduction	IEP	Enrichment
MF	GO:0008081	phosphoric diester hydrolase activity	IEP	Enrichment
CC	GO:0008287	protein serine/threonine phosphatase complex	IEP	Enrichment
BP	GO:0009058	biosynthetic process	IEP	Enrichment
BP	GO:0009059	macromolecule biosynthetic process	IEP	Enrichment
BP	GO:0009308	amine metabolic process	IEP	Enrichment
BP	GO:0009309	amine biosynthetic process	IEP	Enrichment
BP	GO:0009445	putrescine metabolic process	IEP	Enrichment
BP	GO:0009446	putrescine biosynthetic process	IEP	Enrichment
MF	GO:0010277	chlorophyllide a oxygenase [overall] activity	IEP	Enrichment
MF	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	IEP	Enrichment
MF	GO:0016703	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)	IEP	Enrichment
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	Enrichment
MF	GO:0016813	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines	IEP	Enrichment
MF	GO:0019888	protein phosphatase regulator activity	IEP	Enrichment
MF	GO:0019899	enzyme binding	IEP	Enrichment
BP	GO:0019941	modification-dependent protein catabolic process	IEP	Enrichment
MF	GO:0031625	ubiquitin protein ligase binding	IEP	Enrichment
BP	GO:0032940	secretion by cell	IEP	Enrichment
CC	GO:0032991	protein-containing complex	IEP	Enrichment
MF	GO:0033218	amide binding	IEP	Enrichment
MF	GO:0034061	DNA polymerase activity	IEP	Enrichment
BP	GO:0034645	cellular macromolecule biosynthetic process	IEP	Enrichment
BP	GO:0042401	cellular biogenic amine biosynthetic process	IEP	Enrichment
BP	GO:0043632	modification-dependent macromolecule catabolic process	IEP	Enrichment
BP	GO:0044106	cellular amine metabolic process	IEP	Enrichment
BP	GO:0044249	cellular biosynthetic process	IEP	Enrichment
MF	GO:0044389	ubiquitin-like protein ligase binding	IEP	Enrichment
BP	GO:0046903	secretion	IEP	Enrichment
MF	GO:0051537	2 iron, 2 sulfur cluster binding	IEP	Enrichment
CC	GO:0099023	vesicle tethering complex	IEP	Enrichment
MF	GO:0120227	acyl-CoA binding	IEP	Enrichment
BP	GO:0140352	export from cell	IEP	Enrichment
CC	GO:0140535	intracellular protein-containing complex	IEP	Enrichment
MF	GO:1901567	fatty acid derivative binding	IEP	Enrichment
BP	GO:1901576	organic substance biosynthetic process	IEP	Enrichment
MF	GO:1901681	sulfur compound binding	IEP	Enrichment
CC	GO:1903293	phosphatase complex	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR010285	DNA_helicase_pif1-like	38	243

External Links

No external refs found!

Transcript_contig_62265 (62265)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation