Transcript_contig_61848 (61848)

Aliases : 61848

Description : Histone H2A/H2B/H3 [Interproscan].

Gene families : OG_01_0000102 (OrthoFinder) Phylogenetic Tree(s): OG0000102_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Transcript_contig_61848
Cluster	HCCA: Cluster_66

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00000944.18	tig00000944_g5940.t1	Chromatin organisation.histones.H2B-type histone	0.01	OrthoFinder
Cre06.g268100	30778559, HTB10	Chromatin organisation.histones.H2B-type histone	0.01	OrthoFinder
OT_12G00920.1	No alias	Histone H2A/H2B/H3 [Interproscan].	0.02	OrthoFinder
XM_003055466.1	MicpuC2_13212, 13212	Histone H2B	0.02	OrthoFinder
XM_003061989.1	MicpuC2_35705, 35705	Histone H2A/H2B/H3 [Interproscan].	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
CC	GO:0000786	nucleosome	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0032993	protein-DNA complex	None	Extended
CC	GO:0044815	DNA packaging complex	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0005515	protein binding	IEP	Enrichment
MF	GO:0008061	chitin binding	IEP	Enrichment
MF	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	IEP	Enrichment
MF	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	IEP	Enrichment
CC	GO:0018995	host cellular component	IEP	Enrichment
MF	GO:0030246	carbohydrate binding	IEP	Enrichment
CC	GO:0033643	host cell part	IEP	Enrichment
CC	GO:0033646	host intracellular part	IEP	Enrichment
CC	GO:0033647	host intracellular organelle	IEP	Enrichment
CC	GO:0033648	host intracellular membrane-bounded organelle	IEP	Enrichment
CC	GO:0042025	host cell nucleus	IEP	Enrichment
MF	GO:0051213	dioxygenase activity	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR007125	Histone_H2A/H2B/H3	7	98

External Links

No external refs found!