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Transcript_contig_60224 (60224)


Aliases : 60224

Description : Zinc finger, RING-type [Interproscan].


Gene families : OG_01_0000005 (OrthoFinder) Phylogenetic Tree(s): OG0000005_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_60224
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
Cz06g23110.t1 No alias Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder
Dusal.0110s00028.1 33194367 Zinc finger, RING-type [Interproscan]. 0.01 OrthoFinder
EOD25132 No alias Zinc finger, RING-type [Interproscan]. 0.01 OrthoFinder
PTI_14G02400.1 No alias Zinc finger, RING-type [Interproscan]. 0.01 OrthoFinder
SymbC1.scaffold1315.2 1315.2 Zinc finger, RING-type [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005667 transcription regulator complex IEP Enrichment
CC GO:0005669 transcription factor TFIID complex IEP Enrichment
BP GO:0006352 DNA-templated transcription, initiation IEP Enrichment
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Enrichment
CC GO:0090575 RNA polymerase II transcription regulator complex IEP Enrichment
InterPro domains Description Start Stop
IPR001841 Znf_RING 213 250
No external refs found!