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  5. Transcript_contig_60219

Transcript_contig_60219 (60219)


Aliases : 60219

Description : PPM-type phosphatase domain [Interproscan].


Gene families : OG_01_0000057 (OrthoFinder) Phylogenetic Tree(s): OG0000057_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_60219
Cluster HCCA: Cluster_150

Target Alias Description ECC score Gene Family Method Actions
Cre04.g229494 30791095 No description available 0.02 OrthoFinder
Cz03g04100.t1 No alias PPM-type phosphatase domain [Interproscan]. 0.01 OrthoFinder
Cz07g08100.t1 No alias PPM-type phosphatase domain [Interproscan]. 0.01 OrthoFinder
Dusal.2352s00001.1 33185275 PPM-type phosphatase domain [Interproscan]. 0.02 OrthoFinder
OT_07G02200.1 No alias PPM-type phosphatase domain [Interproscan]. 0.02 OrthoFinder
PTI_01G08340.1 No alias PPM-type phosphatase domain [Interproscan]. 0.01 OrthoFinder
PTI_11G00820.1 No alias PPM-type phosphatase domain [Interproscan]. 0.02 OrthoFinder
Sro1838_g300820.1 Contig106.g1232 Linked kinase-associated serine/threonine phosphatase 2C 0.01 OrthoFinder
Sro29_g019230.1 Contig1384.g12766 Linked kinase-associated serine/threonine phosphatase 2C 0.01 OrthoFinder
Sro414_g138260.1 Contig453.g6101 Linked kinase-associated serine/threonine phosphatase 2C 0.01 OrthoFinder
Sro713_g191590.1 Contig2997.g23826 Linked kinase-associated serine/threonine phosphatase 2C 0.01 OrthoFinder
SymbC1.scaffold271.1 271.1 PPM-type phosphatase domain; Zinc finger, MYND-type... 0.01 OrthoFinder
Vocar.0008s0010.1 32897406 PPM-type phosphatase domain [Interproscan]. 0.02 OrthoFinder
Vocar.0013s0168.1 32896256 PPM-type phosphatase domain [Interproscan]. 0.02 OrthoFinder
XM_003058202.1 MicpuC2_33180, 33180 PPM-type phosphatase domain [Interproscan]. 0.01 OrthoFinder
lcl|BLLF01006394.1_cds_GFH32210.1_26687 HaLaN_31394, GFH32210 PPM-type phosphatase domain-containing protein 0.02 OrthoFinder
lcl|LHPG02000025.1_cds_PRW20168.1_5671 PRW20168 Putative phosphatase 2C 53 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Enrichment
MF GO:0004190 aspartic-type endopeptidase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005507 copper ion binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
BP GO:0006325 chromatin organization IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006479 protein methylation IEP Enrichment
MF GO:0008170 N-methyltransferase activity IEP Enrichment
BP GO:0008213 protein alkylation IEP Enrichment
MF GO:0008276 protein methyltransferase activity IEP Enrichment
MF GO:0008289 lipid binding IEP Enrichment
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Enrichment
MF GO:0016278 lysine N-methyltransferase activity IEP Enrichment
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Enrichment
BP GO:0016569 covalent chromatin modification IEP Enrichment
BP GO:0016570 histone modification IEP Enrichment
BP GO:0016571 histone methylation IEP Enrichment
CC GO:0017119 Golgi transport complex IEP Enrichment
BP GO:0018022 peptidyl-lysine methylation IEP Enrichment
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Enrichment
BP GO:0018193 peptidyl-amino acid modification IEP Enrichment
BP GO:0018205 peptidyl-lysine modification IEP Enrichment
BP GO:0018208 peptidyl-proline modification IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
BP GO:0032259 methylation IEP Enrichment
BP GO:0034968 histone lysine methylation IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
MF GO:0042054 histone methyltransferase activity IEP Enrichment
BP GO:0042592 homeostatic process IEP Enrichment
MF GO:0043015 gamma-tubulin binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
CC GO:0043190 ATP-binding cassette (ABC) transporter complex IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0043414 macromolecule methylation IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
BP GO:0048878 chemical homeostasis IEP Enrichment
BP GO:0050801 ion homeostasis IEP Enrichment
BP GO:0055065 metal ion homeostasis IEP Enrichment
BP GO:0055070 copper ion homeostasis IEP Enrichment
BP GO:0055076 transition metal ion homeostasis IEP Enrichment
BP GO:0055080 cation homeostasis IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
BP GO:0065008 regulation of biological quality IEP Enrichment
MF GO:0070001 aspartic-type peptidase activity IEP Enrichment
CC GO:0098533 ATPase dependent transmembrane transport complex IEP Enrichment
BP GO:0098771 inorganic ion homeostasis IEP Enrichment
CC GO:0098797 plasma membrane protein complex IEP Enrichment
CC GO:0099023 vesicle tethering complex IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
CC GO:1902495 transmembrane transporter complex IEP Enrichment
CC GO:1904949 ATPase complex IEP Enrichment
CC GO:1990351 transporter complex IEP Enrichment
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase_dom 62 244
No external refs found!