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  5. Transcript_contig_59897

Transcript_contig_59897 (59897)


Aliases : 59897

Description : Glycoside hydrolase family 47 [Interproscan].


Gene families : OG_01_0000216 (OrthoFinder) Phylogenetic Tree(s): OG0000216_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_59897
Cluster HCCA: Cluster_230

Target Alias Description ECC score Gene Family Method Actions
EOD28029 No alias Glycoside hydrolase family 47 [Interproscan]. 0.01 OrthoFinder
EOD33787 No alias Concanavalin A-like lectin/glucanases superfamily;... 0.01 OrthoFinder
XM_002505310.1 MICPUN_109216, 109216 Glycoside hydrolase family 47 protein 0.02 OrthoFinder
lcl|BLLF01000751.1_cds_GFH14660.1_9137 HaLaN_10759, GFH14660 Alpha-1,2-mannosidase 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEA Interproscan
MF GO:0005509 calcium ion binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Enrichment
CC GO:0000347 THO complex IEP Enrichment
CC GO:0000444 MIS12/MIND type complex IEP Enrichment
CC GO:0000445 THO complex part of transcription export complex IEP Enrichment
CC GO:0000818 nuclear MIS12/MIND complex IEP Enrichment
MF GO:0004180 carboxypeptidase activity IEP Enrichment
MF GO:0004181 metallocarboxypeptidase activity IEP Enrichment
MF GO:0004197 cysteine-type endopeptidase activity IEP Enrichment
CC GO:0005963 magnesium-dependent protein serine/threonine phosphatase complex IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008234 cysteine-type peptidase activity IEP Enrichment
MF GO:0008235 metalloexopeptidase activity IEP Enrichment
MF GO:0008237 metallopeptidase activity IEP Enrichment
MF GO:0008238 exopeptidase activity IEP Enrichment
CC GO:0008287 protein serine/threonine phosphatase complex IEP Enrichment
BP GO:0016071 mRNA metabolic process IEP Enrichment
BP GO:0016485 protein processing IEP Enrichment
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0019888 protein phosphatase regulator activity IEP Enrichment
CC GO:0030117 membrane coat IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
MF GO:0051287 NAD binding IEP Enrichment
BP GO:0051604 protein maturation IEP Enrichment
BP GO:0071586 CAAX-box protein processing IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
CC GO:0140535 intracellular protein-containing complex IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
CC GO:1903293 phosphatase complex IEP Enrichment
InterPro domains Description Start Stop
IPR001382 Glyco_hydro_47 4 160
No external refs found!