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  5. Transcript_contig_59797

Transcript_contig_59797 (59797)


Aliases : 59797

Description : Hypothetical protein


Gene families : OG_01_0000064 (OrthoFinder) Phylogenetic Tree(s): OG0000064_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_59797
Cluster HCCA: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
Dusal.0033s00032.1 33202500 Bestrophin/UPF0187 [Interproscan]. 0.01 OrthoFinder
Sro145_g067260.1 Contig3646.g28172 UPF0187 protein 0.01 OrthoFinder
XM_003059776.1 MicpuC2_59536, 59536 Bestrophin/UPF0187 [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000009.1_cds_PRW56029.1_10086 PRW56029 UPF0187 chloroplastic 0.01 OrthoFinder
lcl|LHPG02000011.1_cds_PRW45440.1_1444 PRW45440 UPF0187 chloroplastic 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004197 cysteine-type endopeptidase activity IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
MF GO:0008234 cysteine-type peptidase activity IEP Enrichment
BP GO:0010970 transport along microtubule IEP Enrichment
BP GO:0016485 protein processing IEP Enrichment
BP GO:0030705 cytoskeleton-dependent intracellular transport IEP Enrichment
BP GO:0031503 protein-containing complex localization IEP Enrichment
BP GO:0042073 intraciliary transport IEP Enrichment
BP GO:0051604 protein maturation IEP Enrichment
BP GO:0071586 CAAX-box protein processing IEP Enrichment
BP GO:0099111 microtubule-based transport IEP Enrichment

No InterPro domains available for this sequence

No external refs found!