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  5. Transcript_contig_59670

Transcript_contig_59670 (59670)


Aliases : 59670

Description : Uroporphyrinogen decarboxylase (URO-D) [Interproscan].


Gene families : OG_01_0000468 (OrthoFinder) Phylogenetic Tree(s): OG0000468_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_59670
Cluster HCCA: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
Cre11.g467700 30776050, UPD1 Coenzyme metabolism.tetrapyrrol... 0.01 OrthoFinder
Cz14g23190.t1 No alias Uroporphyrinogen decarboxylase (URO-D) [Interproscan]. 0.03 OrthoFinder
Cz16g13070.t1 No alias Uroporphyrinogen decarboxylase (URO-D) [Interproscan]. 0.02 OrthoFinder
Dusal.0437s00004.1 33198273 Uroporphyrinogen decarboxylase (URO-D) [Interproscan]. 0.01 OrthoFinder
PTI_04G05280.1 No alias Uroporphyrinogen decarboxylase (URO-D) [Interproscan]. 0.01 OrthoFinder
PTI_10G00460.1 No alias Uroporphyrinogen decarboxylase (URO-D) [Interproscan]. 0.02 OrthoFinder
Sro1503_g278020.1 Contig1159.g11075 Uroporphyrinogen decarboxylase 0.01 OrthoFinder
Sro80_g043120.1 Contig92.g1056 Uroporphyrinogen decarboxylase 0.01 OrthoFinder
TP02G01280.1 No alias Uroporphyrinogen decarboxylase (URO-D) [Interproscan]. 0.01 OrthoFinder
XM_002508574.1 MICPUN_104963, 104963 Uroporphyrinogen decarboxylase chloroplast precursor (HEME2) 0.04 OrthoFinder
XM_003055316.1 MicpuC2_49908, 49908 Uroporphyrinogen decarboxylase chloroplast precursor (HEME1) 0.03 OrthoFinder
XM_003064073.1 MicpuC2_23171, 23171 Uroporphyrinogen decarboxylase chloroplast precursor (HEME2) 0.02 OrthoFinder
lcl|BLLF01000412.1_cds_GFH11531.1_6008 HaLaN_07044, GFH11531 Uroporphyrinogen decarboxylase 0.01 OrthoFinder
lcl|BLLF01001563.1_cds_GFH20041.1_14518 HaLaN_17096, GFH20041 Uroporphyrinogen decarboxylase 0.01 OrthoFinder
lcl|LHPG02000011.1_cds_PRW45352.1_1514 PRW45352 Uroporphyrinogen decarboxylase chloroplast precursor 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004853 uroporphyrinogen decarboxylase activity IEA Interproscan
BP GO:0006779 porphyrin-containing compound biosynthetic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003747 translation release factor activity IEP Enrichment
MF GO:0004408 holocytochrome-c synthase activity IEP Enrichment
MF GO:0004813 alanine-tRNA ligase activity IEP Enrichment
CC GO:0005739 mitochondrion IEP Enrichment
BP GO:0006415 translational termination IEP Enrichment
BP GO:0006419 alanyl-tRNA aminoacylation IEP Enrichment
BP GO:0006720 isoprenoid metabolic process IEP Enrichment
BP GO:0006721 terpenoid metabolic process IEP Enrichment
BP GO:0006790 sulfur compound metabolic process IEP Enrichment
MF GO:0008079 translation termination factor activity IEP Enrichment
MF GO:0008080 N-acetyltransferase activity IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
MF GO:0008171 O-methyltransferase activity IEP Enrichment
MF GO:0008238 exopeptidase activity IEP Enrichment
BP GO:0008299 isoprenoid biosynthetic process IEP Enrichment
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Enrichment
BP GO:0015994 chlorophyll metabolic process IEP Enrichment
BP GO:0015995 chlorophyll biosynthetic process IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
BP GO:0016114 terpenoid biosynthetic process IEP Enrichment
BP GO:0016226 iron-sulfur cluster assembly IEP Enrichment
MF GO:0016410 N-acyltransferase activity IEP Enrichment
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016846 carbon-sulfur lyase activity IEP Enrichment
BP GO:0022411 cellular component disassembly IEP Enrichment
BP GO:0031163 metallo-sulfur cluster assembly IEP Enrichment
BP GO:0032984 protein-containing complex disassembly IEP Enrichment
BP GO:0042440 pigment metabolic process IEP Enrichment
BP GO:0043624 cellular protein complex disassembly IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
BP GO:0046148 pigment biosynthetic process IEP Enrichment
MF GO:0046406 magnesium protoporphyrin IX methyltransferase activity IEP Enrichment
MF GO:0046429 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity IEP Enrichment
MF GO:0052592 oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor IEP Enrichment
MF GO:0070008 serine-type exopeptidase activity IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
InterPro domains Description Start Stop
IPR000257 Uroporphyrinogen_deCOase 47 196
No external refs found!