Transcript_contig_59463 (59463)

Aliases : 59463

Description : TAFII55 protein, conserved region [Interproscan].

Gene families : OG_01_0004757 (OrthoFinder) Phylogenetic Tree(s): OG0004757_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Transcript_contig_59463
Cluster	HCCA: Cluster_44

Target	Alias	Description	ECC score	Gene Family Method	Actions
PTI_08G01160.1	No alias	TAFII55 protein, conserved region [Interproscan].	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005667	transcription regulator complex	None	Extended
CC	GO:0005669	transcription factor TFIID complex	IEA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006352	DNA-templated transcription, initiation	None	Extended
BP	GO:0006367	transcription initiation from RNA polymerase II promoter	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0032774	RNA biosynthetic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034654	nucleobase-containing compound biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
CC	GO:0090575	RNA polymerase II transcription regulator complex	None	Extended
CC	GO:0140513	nuclear protein-containing complex	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003847	1-alkyl-2-acetylglycerophosphocholine esterase activity	IEP	Enrichment
MF	GO:0004371	glycerone kinase activity	IEP	Enrichment
MF	GO:0004751	ribose-5-phosphate isomerase activity	IEP	Enrichment
BP	GO:0006066	alcohol metabolic process	IEP	Enrichment
BP	GO:0006071	glycerol metabolic process	IEP	Enrichment
BP	GO:0006325	chromatin organization	IEP	Enrichment
BP	GO:0006338	chromatin remodeling	IEP	Enrichment
BP	GO:0007034	vacuolar transport	IEP	Enrichment
BP	GO:0009052	pentose-phosphate shunt, non-oxidative branch	IEP	Enrichment
BP	GO:0016042	lipid catabolic process	IEP	Enrichment
MF	GO:0016624	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor	IEP	Enrichment
MF	GO:0016860	intramolecular oxidoreductase activity	IEP	Enrichment
MF	GO:0016861	intramolecular oxidoreductase activity, interconverting aldoses and ketoses	IEP	Enrichment
MF	GO:0016903	oxidoreductase activity, acting on the aldehyde or oxo group of donors	IEP	Enrichment
BP	GO:0019400	alditol metabolic process	IEP	Enrichment
BP	GO:0019751	polyol metabolic process	IEP	Enrichment
BP	GO:0034728	nucleosome organization	IEP	Enrichment
BP	GO:0043044	ATP-dependent chromatin remodeling	IEP	Enrichment
BP	GO:0043486	histone exchange	IEP	Enrichment
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	Enrichment
BP	GO:0071824	protein-DNA complex subunit organization	IEP	Enrichment
BP	GO:1901615	organic hydroxy compound metabolic process	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR006751	TAFII55_prot_cons_reg	6	140

External Links

No external refs found!

Transcript_contig_59463 (59463)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation