Transcript_contig_59114 (59114)

Aliases : 59114

Description : ATPase, AAA-type, core [Interproscan].

Gene families : OG_01_0000074 (OrthoFinder) Phylogenetic Tree(s): OG0000074_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: Transcript_contig_59114
Cluster HCCA: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000093.212 tig00000093_g3637.t1 Enzyme classification.EC_3 hydrolases.EC_3.6 hydrolase... 0.02 OrthoFinder
Cpa|evm.model.tig00001126.11 tig00001126_g7122.t1 Protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1... 0.02 OrthoFinder
Cpa|evm.model.tig00021179.32 tig00021179_g19247.t1 Katanin p60 ATPase-containing subunit A1 OS=Arabidopsis thaliana 0.01 OrthoFinder
Cre02.g079300 30786252, VPS4 Vesicle trafficking.endomembrane trafficking.ESCRT... 0.02 OrthoFinder
EOD10363 No alias Vps4 oligomerisation, C-terminal; AAA ATPase, AAA+ lid... 0.01 OrthoFinder
Sro1177_g249420.1 Contig1274.g11883 Protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1 0.01 OrthoFinder
Sro566_g167770.1 Contig3739.g28672 Fidgetin-like protein 1 0.01 OrthoFinder
Sro750_g196930.1 Contig993.g10028 Proteasome-activating nucleotidase 0.01 OrthoFinder
Transcript_contig_122 122 ATPase, AAA-type, core [Interproscan]. 0.01 OrthoFinder
Transcript_contig_54972 54972 MIT; ATPase, AAA-type, core; Vps4 oligomerisation,... 0.01 OrthoFinder
XM_002501909.1 MICPUN_97315, 97315 Microtubule-severing protein katanin 60kDa subunit (KAT1) 0.02 OrthoFinder
lcl|BLLF01006441.1_cds_GFH32259.1_26736 HaLaN_31449, GFH32259 ATPase, AAA-type, core [Interproscan]. 0.01 OrthoFinder
lcl|LHPG02000013.1_cds_PRW44343.1_2378 PRW44343 Vacuolar sorting-associated 4-like 0.02 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8499688.1_8641 KAA8499688 ATPase family AAA domain-containing protein 1-A 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0001671 ATPase activator activity IEP Enrichment
MF GO:0004519 endonuclease activity IEP Enrichment
MF GO:0004521 endoribonuclease activity IEP Enrichment
MF GO:0004540 ribonuclease activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0006486 protein glycosylation IEP Enrichment
BP GO:0007034 vacuolar transport IEP Enrichment
MF GO:0008047 enzyme activator activity IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
MF GO:0010181 FMN binding IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Enrichment
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Enrichment
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Enrichment
MF GO:0030234 enzyme regulator activity IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
MF GO:0033897 ribonuclease T2 activity IEP Enrichment
BP GO:0043413 macromolecule glycosylation IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
MF GO:0051087 chaperone binding IEP Enrichment
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Enrichment
MF GO:0060590 ATPase regulator activity IEP Enrichment
BP GO:0070085 glycosylation IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
MF GO:0098772 molecular function regulator IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 102 171
No external refs found!