Transcript_contig_59054 (59054)


Aliases : 59054

Description : Vesicle tethering protein Uso1/P115-like , head domain [Interproscan].


Gene families : OG_01_0001375 (OrthoFinder) Phylogenetic Tree(s): OG0001375_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_59054
Cluster HCCA: Cluster_198

Target Alias Description ECC score Gene Family Method Actions
lcl|VRMN01000001.1_cds_KAA8500005.1_8958 KAA8500005 Arginine deiminase 0.01 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEA Interproscan
CC GO:0005737 cytoplasm IEA Interproscan
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0048280 vesicle fusion with Golgi apparatus IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0005488 binding IEP Enrichment
CC GO:0018995 host cellular component IEP Enrichment
CC GO:0033643 host cell part IEP Enrichment
CC GO:0033646 host intracellular part IEP Enrichment
CC GO:0033647 host intracellular organelle IEP Enrichment
CC GO:0033648 host intracellular membrane-bounded organelle IEP Enrichment
CC GO:0042025 host cell nucleus IEP Enrichment
InterPro domains Description Start Stop
IPR006953 Vesicle_Uso1_P115_head 20 187
No external refs found!