Transcript_contig_59042 (59042)

Aliases : 59042

Description : Ergosterol biosynthesis ERG4/ERG24 [Interproscan].

Gene families : OG_01_0001349 (OrthoFinder) Phylogenetic Tree(s): OG0001349_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Transcript_contig_59042
Cluster	HCCA: Cluster_108

Target	Alias	Description	ECC score	Gene Family Method	Actions
TP01G08300.1	No alias	Ergosterol biosynthesis ERG4/ERG24 [Interproscan].	0.01	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006694	steroid biosynthetic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008202	steroid metabolic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
BP	GO:0016125	sterol metabolic process	None	Extended
BP	GO:0016126	sterol biosynthetic process	IEA	Interproscan
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors	None	Extended
MF	GO:0016628	oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	IEA	Interproscan
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901615	organic hydroxy compound metabolic process	None	Extended
BP	GO:1901617	organic hydroxy compound biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0000375	RNA splicing, via transesterification reactions	IEP	Enrichment
BP	GO:0000377	RNA splicing, via transesterification reactions with bulged adenosine as nucleophile	IEP	Enrichment
BP	GO:0000398	mRNA splicing, via spliceosome	IEP	Enrichment
MF	GO:0004611	phosphoenolpyruvate carboxykinase activity	IEP	Enrichment
BP	GO:0006099	tricarboxylic acid cycle	IEP	Enrichment
BP	GO:0006397	mRNA processing	IEP	Enrichment
MF	GO:0008134	transcription factor binding	IEP	Enrichment
BP	GO:0008380	RNA splicing	IEP	Enrichment
MF	GO:0008964	phosphoenolpyruvate carboxylase activity	IEP	Enrichment
BP	GO:0015977	carbon fixation	IEP	Enrichment
BP	GO:0016071	mRNA metabolic process	IEP	Enrichment
MF	GO:0016830	carbon-carbon lyase activity	IEP	Enrichment
MF	GO:0016831	carboxy-lyase activity	IEP	Enrichment
MF	GO:0017025	TBP-class protein binding	IEP	Enrichment
MF	GO:0017069	snRNA binding	IEP	Enrichment
MF	GO:0017070	U6 snRNA binding	IEP	Enrichment
MF	GO:0030246	carbohydrate binding	IEP	Enrichment
MF	GO:0030247	polysaccharide binding	IEP	Enrichment
MF	GO:0030623	U5 snRNA binding	IEP	Enrichment
MF	GO:0140296	general transcription initiation factor binding	IEP	Enrichment
MF	GO:2001070	starch binding	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR001171	Ergosterol_biosynth_ERG4_ERG24	80	228

External Links

No external refs found!