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  5. Transcript_contig_59004

Transcript_contig_59004 (59004)


Aliases : 59004

Description : Amidase signature domain [Interproscan].


Gene families : OG_01_0000341 (OrthoFinder) Phylogenetic Tree(s): OG0000341_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_59004
Cluster HCCA: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
Sro2231_g320030.1 Contig3905.g29945 Glutamyl-tRNA(Gln) amidotransferase subunit A 0.01 OrthoFinder
SymbC1.scaffold4.1039 4.1039 5-formyltetrahydrofolate cyclo-ligase; Protein of... 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001671 ATPase activator activity IEP Enrichment
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0006072 glycerol-3-phosphate metabolic process IEP Enrichment
BP GO:0006629 lipid metabolic process IEP Enrichment
BP GO:0006694 steroid biosynthetic process IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006811 ion transport IEP Enrichment
BP GO:0006812 cation transport IEP Enrichment
MF GO:0008047 enzyme activator activity IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008202 steroid metabolic process IEP Enrichment
MF GO:0010181 FMN binding IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0016229 steroid dehydrogenase activity IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Enrichment
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016791 phosphatase activity IEP Enrichment
BP GO:0030001 metal ion transport IEP Enrichment
MF GO:0030234 enzyme regulator activity IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0046168 glycerol-3-phosphate catabolic process IEP Enrichment
BP GO:0046434 organophosphate catabolic process IEP Enrichment
MF GO:0051087 chaperone binding IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
MF GO:0051287 NAD binding IEP Enrichment
BP GO:0052646 alditol phosphate metabolic process IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Enrichment
MF GO:0060590 ATPase regulator activity IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
MF GO:0098772 molecular function regulator IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
BP GO:1901136 carbohydrate derivative catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR023631 Amidase_dom 1 179
No external refs found!