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  5. Cpa|evm.model.tig00000769.10

Cpa|evm.model.tig00000769.10 (tig00000769_g4005.t1)


Aliases : tig00000769_g4005.t1

Description : Katanin p60 ATPase-containing subunit A1 OS=Arabidopsis thaliana


Gene families : OG_01_0000074 (OrthoFinder) Phylogenetic Tree(s): OG0000074_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000769.10
Cluster HCCA: Cluster_202

Target Alias Description ECC score Gene Family Method Actions
Cre02.g079300 30786252, VPS4 Vesicle trafficking.endomembrane trafficking.ESCRT... 0.03 OrthoFinder
Transcript_contig_54972 54972 MIT; ATPase, AAA-type, core; Vps4 oligomerisation,... 0.01 OrthoFinder
Transcript_contig_89153 89153 ATPase, AAA-type, core [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008017 microtubule binding IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
InterPro domains Description Start Stop
IPR000253 FHA_dom 137 204
IPR003959 ATPase_AAA_core 959 1113
IPR041569 AAA_lid_3 1136 1175
No external refs found!