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  5. Transcript_contig_58913

Transcript_contig_58913 (58913)


Aliases : 58913

Description : UspA [Interproscan].


Gene families : OG_01_0001158 (OrthoFinder) Phylogenetic Tree(s): OG0001158_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_58913
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
Cre12.g542350 30792840 No description available 0.01 OrthoFinder
lcl|BLLF01000688.1_cds_GFH14123.1_8600 HaLaN_10116, GFH14123 Methyltransferase 0.01 OrthoFinder
lcl|LHPG02000002.1_cds_PRW60469.1_4169 PRW60469 Adenine nucleotide alpha hydrolase 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR006016 UspA 4 46
No external refs found!