Transcript_contig_58678 (58678)

Aliases : 58678

Description : Photosystem II PsbO, manganese-stabilising [Interproscan].

Gene families : OG_01_0001803 (OrthoFinder) Phylogenetic Tree(s): OG0001803_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Transcript_contig_58678
Cluster	HCCA: Cluster_15

Target	Alias	Description	ECC score	Gene Family Method
Cre09.g396213	30780284, PSBO	Photosynthesis.photophosphorylation.photosystem II.PS-II...	0.03	OrthoFinder
Cz16g19040.t1	No alias	Photosystem II PsbO, manganese-stabilising [Interproscan].	0.03	OrthoFinder
Dusal.0128s00011.1	33185282	Photosystem II PsbO, manganese-stabilising [Interproscan].	0.02	OrthoFinder
OT_14G00180.1	No alias	Photosystem II PsbO, manganese-stabilising [Interproscan].	0.02	OrthoFinder
PTI_08G03550.1	No alias	Photosystem II PsbO, manganese-stabilising [Interproscan].	0.01	OrthoFinder
Sro852_g211010.1	Contig107.g1243	Enhancer protein 1, chloroplastic	0.01	OrthoFinder
Vocar.0009s0198.1	32893184	Photosystem II PsbO, manganese-stabilising [Interproscan].	0.02	OrthoFinder
XM_002505763.1	MICPUN_92317, 92317	Photosystem II manganese-stabilizing polypeptide (PSBO)	0.02	OrthoFinder
XM_003063805.1	MicpuC2_48994, 48994	Photosystem II manganese-stabilizing polypeptide (PSBO)	0.01	OrthoFinder
lcl\|BLLF01004367.1_cds_GFH29477.1_23954	HaLaN_28140, GFH29477	Photosystem II PsbO, manganese-stabilising [Interproscan].	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0008150	biological_process	None	Extended
CC	GO:0009654	photosystem II oxygen evolving complex	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010109	regulation of photosynthesis	None	Extended
BP	GO:0010207	photosystem II assembly	IEA	Interproscan
MF	GO:0010242	oxygen evolving activity	IEA	Interproscan
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034622	cellular protein-containing complex assembly	None	Extended
BP	GO:0042548	regulation of photosynthesis, light reaction	None	Extended
BP	GO:0042549	photosystem II stabilization	IEA	Interproscan
BP	GO:0043467	regulation of generation of precursor metabolites and energy	None	Extended
BP	GO:0043933	protein-containing complex subunit organization	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0065003	protein-containing complex assembly	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1990204	oxidoreductase complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0001671	ATPase activator activity	IEP	Enrichment
MF	GO:0004497	monooxygenase activity	IEP	Enrichment
BP	GO:0006338	chromatin remodeling	IEP	Enrichment
BP	GO:0006355	regulation of transcription, DNA-templated	IEP	Enrichment
MF	GO:0008047	enzyme activator activity	IEP	Enrichment
CC	GO:0009522	photosystem I	IEP	Enrichment
CC	GO:0009538	photosystem I reaction center	IEP	Enrichment
BP	GO:0009889	regulation of biosynthetic process	IEP	Enrichment
MF	GO:0010277	chlorophyllide a oxygenase [overall] activity	IEP	Enrichment
BP	GO:0010468	regulation of gene expression	IEP	Enrichment
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	Enrichment
MF	GO:0016703	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)	IEP	Enrichment
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	Enrichment
MF	GO:0030151	molybdenum ion binding	IEP	Enrichment
MF	GO:0030234	enzyme regulator activity	IEP	Enrichment
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	Enrichment
BP	GO:0034728	nucleosome organization	IEP	Enrichment
MF	GO:0042393	histone binding	IEP	Enrichment
BP	GO:0043044	ATP-dependent chromatin remodeling	IEP	Enrichment
BP	GO:0043486	histone exchange	IEP	Enrichment
MF	GO:0051087	chaperone binding	IEP	Enrichment
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	Enrichment
BP	GO:0051252	regulation of RNA metabolic process	IEP	Enrichment
MF	GO:0051537	2 iron, 2 sulfur cluster binding	IEP	Enrichment
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	Enrichment
MF	GO:0060589	nucleoside-triphosphatase regulator activity	IEP	Enrichment
MF	GO:0060590	ATPase regulator activity	IEP	Enrichment
BP	GO:0071824	protein-DNA complex subunit organization	IEP	Enrichment
BP	GO:0080090	regulation of primary metabolic process	IEP	Enrichment
MF	GO:0098772	molecular function regulator	IEP	Enrichment
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	Enrichment
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	IEP	Enrichment
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR002628	PSII_MSP	65	296

External Links

No external refs found!

Transcript_contig_58678 (58678)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation