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  5. Transcript_contig_58595

Transcript_contig_58595 (58595)


Aliases : 58595

Description : WLM domain [Interproscan].


Gene families : OG_01_0002851 (OrthoFinder) Phylogenetic Tree(s): OG0002851_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_58595
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000670.9 tig00000670_g3016.t1 No description available 0.01 OrthoFinder
Cz19g04250.t1 No alias PUB domain; WLM domain [Interproscan]. 0.02 OrthoFinder
EOD28162 No alias WLM domain [Interproscan]. 0.02 OrthoFinder
EOD36109 No alias WLM domain [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01001632.1_cds_GFH20430.1_14907 HaLaN_17549, GFH20430 WLM domain [Interproscan]. 0.03 OrthoFinder
lcl|LHPG02000027.1_cds_PRW05901.1_5902 PRW05901 WLM domain [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0015399 primary active transmembrane transporter activity IEP Enrichment
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
MF GO:0030170 pyridoxal phosphate binding IEP Enrichment
MF GO:0035596 methylthiotransferase activity IEP Enrichment
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Enrichment
MF GO:0050497 alkylthioltransferase activity IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
MF GO:0070279 vitamin B6 binding IEP Enrichment
InterPro domains Description Start Stop
IPR013536 WLM_dom 74 188
No external refs found!