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  5. Transcript_contig_58555

Transcript_contig_58555 (58555)


Aliases : 58555

Description : Protein-tyrosine phosphatase-like, PTPLA [Interproscan].


Gene families : OG_01_0000442 (OrthoFinder) Phylogenetic Tree(s): OG0000442_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_58555
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
PTI_10G03530.1 No alias Hypothetical protein 0.01 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495928.1_1926 KAA8495928 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase PASTICCINO 2B 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
CC GO:0018995 host cellular component IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
CC GO:0033643 host cell part IEP Enrichment
CC GO:0033646 host intracellular part IEP Enrichment
CC GO:0033647 host intracellular organelle IEP Enrichment
CC GO:0033648 host intracellular membrane-bounded organelle IEP Enrichment
CC GO:0042025 host cell nucleus IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
InterPro domains Description Start Stop
IPR007482 Tyr_Pase-like_PTPLA 59 232
No external refs found!