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  5. Transcript_contig_58466

Transcript_contig_58466 (58466)


Aliases : 58466

Description : ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain [Interproscan].


Gene families : OG_01_0000525 (OrthoFinder) Phylogenetic Tree(s): OG0000525_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_58466
Cluster HCCA: Cluster_243

Target Alias Description ECC score Gene Family Method Actions
OT_03G01150.1 No alias ATP synthase, alpha subunit, C-terminal; ATPase,... 0.01 OrthoFinder
XM_002501684.1 MICPUN_57790, 57790 H+-or Na+-translocating f-type, v-type and A-type ATPase... 0.02 OrthoFinder
lcl|BLLF01002955.1_cds_GFH25917.1_20394 HaLaN_23963, GFH25917 ATP synthase subunit alpha 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000228 nuclear chromosome IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
MF GO:0004843 thiol-dependent deubiquitinase IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
BP GO:0006338 chromatin remodeling IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
MF GO:0008242 omega peptidase activity IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Enrichment
CC GO:0030176 integral component of endoplasmic reticulum membrane IEP Enrichment
CC GO:0030880 RNA polymerase complex IEP Enrichment
CC GO:0031227 intrinsic component of endoplasmic reticulum membrane IEP Enrichment
CC GO:0031300 intrinsic component of organelle membrane IEP Enrichment
CC GO:0031301 integral component of organelle membrane IEP Enrichment
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Enrichment
MF GO:0101005 deubiquitinase activity IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
CC GO:1990234 transferase complex IEP Enrichment
MF GO:1990380 Lys48-specific deubiquitinase activity IEP Enrichment
InterPro domains Description Start Stop
IPR000194 ATPase_F1/V1/A1_a/bsu_nucl-bd 14 140
No external refs found!