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  5. Transcript_contig_58430

Transcript_contig_58430 (58430)


Aliases : 58430

Description : AMP-dependent synthetase/ligase; AMP-binding enzyme, C-terminal domain [Interproscan].


Gene families : OG_01_0000081 (OrthoFinder) Phylogenetic Tree(s): OG0000081_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_58430
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
Dusal.2224s00001.1 33195745 AMP-dependent synthetase/ligase [Interproscan]. 0.01 OrthoFinder
OT_01G04590.1 No alias Phosphopantetheine binding ACP domain; AMP-dependent... 0.02 OrthoFinder
OT_01G06180.1 No alias AMP-dependent synthetase/ligase; AMP-binding enzyme,... 0.01 OrthoFinder
PTI_09G01950.1 No alias AMP-binding enzyme, C-terminal domain; AMP-dependent... 0.01 OrthoFinder
lcl|LHPG02000014.1_cds_PRW39207.1_2689 PRW39207 Long-chain-fatty-acid-ligase 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004057 arginyltransferase activity IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
MF GO:0008410 CoA-transferase activity IEP Enrichment
BP GO:0016598 protein arginylation IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016755 aminoacyltransferase activity IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
MF GO:0050661 NADP binding IEP Enrichment
MF GO:0070569 uridylyltransferase activity IEP Enrichment
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig 1 111
IPR025110 AMP-bd_C 128 219
No external refs found!