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  5. Transcript_contig_58312

Transcript_contig_58312 (58312)


Aliases : 58312

Description : Hypothetical protein


Gene families : OG_01_0000194 (OrthoFinder) Phylogenetic Tree(s): OG0000194_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_58312
Cluster HCCA: Cluster_252

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000480.46 tig00000480_g1314.t1 Protein root UVB sensitive 1, chloroplastic... 0.01 OrthoFinder
Cre09.g396050 30780666 Protein root UVB sensitive 4 OS=Arabidopsis thaliana 0.01 OrthoFinder
XM_003059392.1 MicpuC2_40141, 40141 Root UVB sensitive family [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006325 chromatin organization IEP Enrichment
BP GO:0006354 DNA-templated transcription, elongation IEP Enrichment
BP GO:0006368 transcription elongation from RNA polymerase II promoter IEP Enrichment
CC GO:0008023 transcription elongation factor complex IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
MF GO:0008173 RNA methyltransferase activity IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
BP GO:0016569 covalent chromatin modification IEP Enrichment
BP GO:0016570 histone modification IEP Enrichment
CC GO:0016593 Cdc73/Paf1 complex IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
BP GO:0032259 methylation IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
BP GO:0070070 proton-transporting V-type ATPase complex assembly IEP Enrichment
BP GO:0070071 proton-transporting two-sector ATPase complex assembly IEP Enrichment
BP GO:0070072 vacuolar proton-transporting V-type ATPase complex assembly IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment

No InterPro domains available for this sequence

No external refs found!