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Aliases : 58150
Description : Nucleoporin Nup188 [Interproscan].
Gene families : OG_01_0003850 (OrthoFinder) Phylogenetic Tree(s): OG0003850_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Transcript_contig_58150 | |
| Cluster | HCCA: Cluster_220 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cz08g09060.t1 | No alias | Nucleoporin Nup188 [Interproscan]. | 0.02 | OrthoFinder | |
| Dusal.0112s00013.1 | 33195934 | Hypothetical protein | 0.01 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0017056 | structural constituent of nuclear pore | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000228 | nuclear chromosome | IEP | Enrichment |
| MF | GO:0004721 | phosphoprotein phosphatase activity | IEP | Enrichment |
| CC | GO:0005575 | cellular_component | IEP | Enrichment |
| CC | GO:0005643 | nuclear pore | IEP | Enrichment |
| CC | GO:0005694 | chromosome | IEP | Enrichment |
| CC | GO:0005743 | mitochondrial inner membrane | IEP | Enrichment |
| CC | GO:0005747 | mitochondrial respiratory chain complex I | IEP | Enrichment |
| BP | GO:0006325 | chromatin organization | IEP | Enrichment |
| BP | GO:0006338 | chromatin remodeling | IEP | Enrichment |
| BP | GO:0006405 | RNA export from nucleus | IEP | Enrichment |
| BP | GO:0006406 | mRNA export from nucleus | IEP | Enrichment |
| BP | GO:0006913 | nucleocytoplasmic transport | IEP | Enrichment |
| MF | GO:0008138 | protein tyrosine/serine/threonine phosphatase activity | IEP | Enrichment |
| BP | GO:0015931 | nucleobase-containing compound transport | IEP | Enrichment |
| CC | GO:0016020 | membrane | IEP | Enrichment |
| BP | GO:0016311 | dephosphorylation | IEP | Enrichment |
| MF | GO:0016791 | phosphatase activity | IEP | Enrichment |
| BP | GO:0016973 | poly(A)+ mRNA export from nucleus | IEP | Enrichment |
| CC | GO:0019866 | organelle inner membrane | IEP | Enrichment |
| BP | GO:0030001 | metal ion transport | IEP | Enrichment |
| CC | GO:0030964 | NADH dehydrogenase complex | IEP | Enrichment |
| CC | GO:0031090 | organelle membrane | IEP | Enrichment |
| CC | GO:0031966 | mitochondrial membrane | IEP | Enrichment |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | Enrichment |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Enrichment |
| CC | GO:0045271 | respiratory chain complex I | IEP | Enrichment |
| BP | GO:0050657 | nucleic acid transport | IEP | Enrichment |
| BP | GO:0050658 | RNA transport | IEP | Enrichment |
| BP | GO:0051028 | mRNA transport | IEP | Enrichment |
| BP | GO:0051168 | nuclear export | IEP | Enrichment |
| BP | GO:0051169 | nuclear transport | IEP | Enrichment |
| BP | GO:0051236 | establishment of RNA localization | IEP | Enrichment |
| CC | GO:0098798 | mitochondrial protein-containing complex | IEP | Enrichment |
| CC | GO:0098800 | inner mitochondrial membrane protein complex | IEP | Enrichment |
| CC | GO:0098803 | respiratory chain complex | IEP | Enrichment |
| CC | GO:0110165 | cellular anatomical entity | IEP | Enrichment |
| CC | GO:1990204 | oxidoreductase complex | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR018864 | Nucleoporin_Nup188_N | 43 | 598 |
| No external refs found! |