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  5. Transcript_contig_57964

Transcript_contig_57964 (57964)


Aliases : 57964

Description : Methyltransferase domain 25 [Interproscan].


Gene families : OG_01_0000521 (OrthoFinder) Phylogenetic Tree(s): OG0000521_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_57964
Cluster HCCA: Cluster_68

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001049.36 tig00001049_g6682.t1 Probable protein arginine N-methyltransferase 1.2... 0.01 OrthoFinder
Cre01.g051000 30788621 Protein arginine N-methyltransferase 1.1 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cre16.g685900 30777942, PRM3 Protein biosynthesis.cytosolic ribosome.ribosome... 0.06 OrthoFinder
Cz06g12180.t1 No alias Ribosomal protein L11 methyltransferase (PrmA) [Interproscan]. 0.01 OrthoFinder
Cz07g01300.t1 No alias Methyltransferase domain 25 [Interproscan]. 0.08 OrthoFinder
Dusal.0035s00013.1 33196680 Methyltransferase domain 25 [Interproscan]. 0.01 OrthoFinder
Dusal.0244s00003.1 33186513 Methyltransferase domain 25 [Interproscan]. 0.01 OrthoFinder
OT_13G00260.1 No alias Methyltransferase domain 25 [Interproscan]. 0.04 OrthoFinder
TP05G00940.1 No alias Ribosomal protein L11 methyltransferase (PrmA) [Interproscan]. 0.04 OrthoFinder
XM_002501955.1 MICPUN_81638, 81638 Protein arginine methyltransferase 0.02 OrthoFinder
XM_002505051.1 MICPUN_109100, 109100 Protein arginine methyltransferase 0.06 OrthoFinder
XM_002506981.1 MICPUN_77641, 77641 Ribosomal protein L11 methyltransferase (PrmA) [Interproscan]. 0.04 OrthoFinder
XM_003054725.1 MicpuC2_49807, 49807 Protein arginine methyltransferase 0.03 OrthoFinder
XM_003057488.1 MicpuC2_14868, 14868 Protein arginine methyltransferase 0.05 OrthoFinder
XM_003060468.1 MicpuC2_34773, 34773 Methyltransferase domain 25 [Interproscan]. 0.03 OrthoFinder
lcl|BLLF01000105.1_cds_GFH07609.1_2086 HaLaN_02437, GFH07609 Ribosomal protein L11 methyltransferase (PrmA) [Interproscan]. 0.05 OrthoFinder
lcl|LHPG02000008.1_cds_PRW56855.1_9909 PRW56855 Arginine N-methyltransferase 0.02 OrthoFinder
lcl|LHPG02000026.1_cds_PRW18336.1_5803 PRW18336 Putative arginine N-methyltransferase 3 0.06 OrthoFinder
lcl|VRMN01000006.1_cds_KAA8493522.1_4284 KAA8493522 Protein arginine N-methyltransferase 1 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
BP GO:0001522 pseudouridine synthesis IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0003746 translation elongation factor activity IEP Enrichment
MF GO:0004000 adenosine deaminase activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005730 nucleolus IEP Enrichment
CC GO:0005739 mitochondrion IEP Enrichment
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Enrichment
BP GO:0006355 regulation of transcription, DNA-templated IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
BP GO:0006414 translational elongation IEP Enrichment
MF GO:0008134 transcription factor binding IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
BP GO:0009889 regulation of biosynthetic process IEP Enrichment
MF GO:0009982 pseudouridine synthase activity IEP Enrichment
BP GO:0010468 regulation of gene expression IEP Enrichment
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0019222 regulation of metabolic process IEP Enrichment
MF GO:0019239 deaminase activity IEP Enrichment
CC GO:0019867 outer membrane IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
BP GO:0031323 regulation of cellular metabolic process IEP Enrichment
BP GO:0031326 regulation of cellular biosynthetic process IEP Enrichment
BP GO:0032259 methylation IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051252 regulation of RNA metabolic process IEP Enrichment
BP GO:0060255 regulation of macromolecule metabolic process IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
BP GO:0080090 regulation of primary metabolic process IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Enrichment
BP GO:2001141 regulation of RNA biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR041698 Methyltransf_25 259 380
No external refs found!