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  5. Transcript_contig_57768

Transcript_contig_57768 (57768)


Aliases : 57768

Description : Hypothetical protein


Gene families : OG_01_0000525 (OrthoFinder) Phylogenetic Tree(s): OG0000525_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_57768
Cluster HCCA: Cluster_176

Target Alias Description ECC score Gene Family Method Actions
Cz04g32030.t1 No alias ATPase, F1/V1/A1 complex, alpha/beta subunit,... 0.01 OrthoFinder
Dusal.0190s00003.1 33189450 ATPase, F1/V1/A1 complex, alpha/beta subunit,... 0.02 OrthoFinder
Vocar.0016s0055.1 32897905 ATPase, F1/V1/A1 complex, alpha/beta subunit,... 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Enrichment
MF GO:0000166 nucleotide binding IEP Enrichment
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
BP GO:0006720 isoprenoid metabolic process IEP Enrichment
BP GO:0006721 terpenoid metabolic process IEP Enrichment
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Enrichment
BP GO:0008299 isoprenoid biosynthetic process IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
BP GO:0016071 mRNA metabolic process IEP Enrichment
BP GO:0016114 terpenoid biosynthetic process IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Enrichment
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0033218 amide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
MF GO:0046429 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity IEP Enrichment
MF GO:0052592 oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:0120227 acyl-CoA binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
MF GO:1901567 fatty acid derivative binding IEP Enrichment
MF GO:1901681 sulfur compound binding IEP Enrichment

No InterPro domains available for this sequence

No external refs found!