Transcript_contig_57742 (57742)

Aliases : 57742

Description : Translation elongation factor EFTu-like, domain 2; Transcription factor, GTP-binding domain; Elongation factor EFG, domain V-like [Interproscan].

Gene families : OG_01_0000865 (OrthoFinder) Phylogenetic Tree(s): OG0000865_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Transcript_contig_57742
Cluster	HCCA: Cluster_127

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00000194.55	tig00000194_g14785.t1	Putative elongation factor TypA-like SVR3, chloroplastic...	0.01	OrthoFinder
Cpa\|evm.model.tig00020614.28	tig00020614_g12138.t1	Putative elongation factor TypA-like SVR3, chloroplastic...	0.01	OrthoFinder
Cz13g04030.t1	No alias	Elongation factor EFG, domain V-like; Translation...	0.03	OrthoFinder
Dusal.0181s00024.1	33189303	Transcription factor, GTP-binding domain; Translation...	0.03	OrthoFinder
EOD04480	No alias	Putative mitochondrial elongation factor [Ensembl].	0.01	OrthoFinder
Sro5_g004520.1	Contig4001.g30767	Factor TypA-like SVR3, chloroplastic	0.01	OrthoFinder
Vocar.0013s0254.1	32896180	Elongation factor EFG, domain V-like; Transcription...	0.03	OrthoFinder
Vocar.0043s0016.1	32886869	Transcription factor, GTP-binding domain [Interproscan].	0.02	OrthoFinder
Vocar.0043s0017.1	32886915	Elongation factor EFG, domain V-like [Interproscan].	0.02	OrthoFinder
lcl\|BLLF01007041.1_cds_GFH32732.1_27209	HaLaN_32000, GFH32732	GTP binding protein TypA	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004222	metalloendopeptidase activity	IEP	Enrichment
MF	GO:0004497	monooxygenase activity	IEP	Enrichment
BP	GO:0006066	alcohol metabolic process	IEP	Enrichment
MF	GO:0008237	metallopeptidase activity	IEP	Enrichment
MF	GO:0008942	nitrite reductase [NAD(P)H] activity	IEP	Enrichment
MF	GO:0010277	chlorophyllide a oxygenase [overall] activity	IEP	Enrichment
BP	GO:0016311	dephosphorylation	IEP	Enrichment
MF	GO:0016491	oxidoreductase activity	IEP	Enrichment
MF	GO:0016661	oxidoreductase activity, acting on other nitrogenous compounds as donors	IEP	Enrichment
MF	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	IEP	Enrichment
MF	GO:0016703	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)	IEP	Enrichment
BP	GO:0019751	polyol metabolic process	IEP	Enrichment
MF	GO:0031072	heat shock protein binding	IEP	Enrichment
BP	GO:0043647	inositol phosphate metabolic process	IEP	Enrichment
BP	GO:0044262	cellular carbohydrate metabolic process	IEP	Enrichment
BP	GO:0044282	small molecule catabolic process	IEP	Enrichment
BP	GO:0046164	alcohol catabolic process	IEP	Enrichment
BP	GO:0046174	polyol catabolic process	IEP	Enrichment
BP	GO:0046434	organophosphate catabolic process	IEP	Enrichment
BP	GO:0046838	phosphorylated carbohydrate dephosphorylation	IEP	Enrichment
BP	GO:0046855	inositol phosphate dephosphorylation	IEP	Enrichment
MF	GO:0046857	oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor	IEP	Enrichment
MF	GO:0051082	unfolded protein binding	IEP	Enrichment
MF	GO:0051536	iron-sulfur cluster binding	IEP	Enrichment
MF	GO:0051537	2 iron, 2 sulfur cluster binding	IEP	Enrichment
MF	GO:0051540	metal cluster binding	IEP	Enrichment
BP	GO:0055114	obsolete oxidation-reduction process	IEP	Enrichment
BP	GO:0071545	inositol phosphate catabolic process	IEP	Enrichment
MF	GO:0098809	nitrite reductase activity	IEP	Enrichment
BP	GO:1901615	organic hydroxy compound metabolic process	IEP	Enrichment
BP	GO:1901616	organic hydroxy compound catabolic process	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR004161	EFTu-like_2	302	373
IPR000795	T_Tr_GTP-bd_dom	87	275
IPR000640	EFG_V-like	483	568

External Links

No external refs found!

Transcript_contig_57742 (57742)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation