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  5. Transcript_contig_57672

Transcript_contig_57672 (57672)


Aliases : 57672

Description : Root UVB sensitive family [Interproscan].


Gene families : OG_01_0000194 (OrthoFinder) Phylogenetic Tree(s): OG0000194_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_57672
Cluster HCCA: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
TP11G00500.1 No alias Root UVB sensitive family [Interproscan]. 0.01 OrthoFinder
Vocar.0019s0031.1 32892629 Root UVB sensitive family [Interproscan]. 0.01 OrthoFinder
XM_002507989.1 MICPUN_102027, 102027 Root UVB sensitive family [Interproscan]. 0.02 OrthoFinder
XM_003059392.1 MicpuC2_40141, 40141 Root UVB sensitive family [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004784 superoxide dismutase activity IEP Enrichment
BP GO:0006801 superoxide metabolic process IEP Enrichment
MF GO:0016209 antioxidant activity IEP Enrichment
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Enrichment
MF GO:0030246 carbohydrate binding IEP Enrichment
MF GO:0030247 polysaccharide binding IEP Enrichment
BP GO:0072593 reactive oxygen species metabolic process IEP Enrichment
MF GO:2001070 starch binding IEP Enrichment
InterPro domains Description Start Stop
IPR006968 RUS_fam 1 193
No external refs found!