Transcript_contig_57509 (57509)

Aliases : 57509

Description : WD40 repeat [Interproscan].

Gene families : OG_01_0001314 (OrthoFinder) Phylogenetic Tree(s): OG0001314_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Transcript_contig_57509
Cluster	HCCA: Cluster_233

Target	Alias	Description	ECC score	Gene Family Method	Actions
XM_002508419.1	MICPUN_85903, 85903	WD40 repeat [Interproscan].	0.01	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan

Type	GO Term	Name	Evidence	Source
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Enrichment
MF	GO:0004559	alpha-mannosidase activity	IEP	Enrichment
MF	GO:0004571	mannosyl-oligosaccharide 1,2-alpha-mannosidase activity	IEP	Enrichment
MF	GO:0005509	calcium ion binding	IEP	Enrichment
BP	GO:0006891	intra-Golgi vesicle-mediated transport	IEP	Enrichment
MF	GO:0015923	mannosidase activity	IEP	Enrichment
MF	GO:0015924	mannosyl-oligosaccharide mannosidase activity	IEP	Enrichment
BP	GO:0016192	vesicle-mediated transport	IEP	Enrichment
MF	GO:0016746	acyltransferase activity	IEP	Enrichment
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	IEP	Enrichment
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	Enrichment
CC	GO:0017119	Golgi transport complex	IEP	Enrichment
BP	GO:0048193	Golgi vesicle transport	IEP	Enrichment
CC	GO:0099023	vesicle tethering complex	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR001680	WD40_repeat	275	316
IPR001680	WD40_repeat	57	96
IPR001680	WD40_repeat	339	372
IPR001680	WD40_repeat	185	224
IPR001680	WD40_repeat	230	268
IPR001680	WD40_repeat	142	180
IPR001680	WD40_repeat	101	138

External Links

No external refs found!