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  5. Transcript_contig_57403

Transcript_contig_57403 (57403)


Aliases : 57403

Description : Beta-ketoacyl synthase, N-terminal [Interproscan].


Gene families : OG_01_0000302 (OrthoFinder) Phylogenetic Tree(s): OG0000302_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_57403
Cluster HCCA: Cluster_203

Target Alias Description ECC score Gene Family Method Actions
Cre07.g335300 30775292, KAS2 Lipid metabolism.fatty acid synthesis.plastidial Type II... 0.03 OrthoFinder
Cre11.g467723 30775833, KAS1 Lipid metabolism.fatty acid synthesis.plastidial Type II... 0.03 OrthoFinder
Cz02g14160.t1 No alias Beta-ketoacyl synthase, C-terminal; Beta-ketoacyl... 0.03 OrthoFinder
EOD27654 No alias 3-oxoacyl-synthase [Ensembl]. 0.01 OrthoFinder
OT_02G01660.1 No alias Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl... 0.03 OrthoFinder
OT_15G01580.1 No alias Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl... 0.03 OrthoFinder
Sro1319_g262290.1 Contig3198.g25290 3-oxoacyl-[acyl-carrier-protein] synthase 2 (Fragment) 0.03 OrthoFinder
TP05G00600.1 No alias Beta-ketoacyl synthase, C-terminal; Beta-ketoacyl... 0.01 OrthoFinder
UNPLg00257.t1 No alias Beta-ketoacyl synthase, C-terminal; Beta-ketoacyl... 0.04 OrthoFinder
Vocar.0013s0258.1 32896259 Beta-ketoacyl synthase, C-terminal; Beta-ketoacyl... 0.02 OrthoFinder
XM_002504242.1 MICPUN_107432, 107432 Hypothetical protein (KAS1) 0.03 OrthoFinder
XM_002504991.1 MICPUN_107159, 107159 Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl... 0.02 OrthoFinder
lcl|BLLF01000159.1_cds_GFH08411.1_2888 HaLaN_03364, GFH08411 3-oxoacyl-[acyl-carrier-protein] synthase 0.05 OrthoFinder
lcl|BLLF01001148.1_cds_GFH17445.1_11922 HaLaN_14083, GFH17445 3-oxoacyl-[acyl-carrier-protein] synthase 0.05 OrthoFinder
lcl|BLLF01001560.1_cds_GFH20019.1_14496 HaLaN_17068, GFH20019 3-oxoacyl-[acyl-carrier-protein] synthase 0.01 OrthoFinder
lcl|BLLF01002349.1_cds_GFH23740.1_18217 HaLaN_21401, GFH23740 3-oxoacyl-[acyl-carrier] mitochondrial 0.01 OrthoFinder
lcl|BLLF01004055.1_cds_GFH28828.1_23305 HaLaN_27381, GFH28828 3-oxoacyl-[acyl-carrier-protein] synthase 0.01 OrthoFinder
lcl|VRMN01000009.1_cds_KAA8492465.1_9158 KAA8492465 3-oxoacyl-acyl-carrier-protein synthase I, chloroplastic 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Enrichment
MF GO:0004645 1,4-alpha-oligoglucan phosphorylase activity IEP Enrichment
MF GO:0004817 cysteine-tRNA ligase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006090 pyruvate metabolic process IEP Enrichment
BP GO:0006096 glycolytic process IEP Enrichment
BP GO:0006165 nucleoside diphosphate phosphorylation IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006423 cysteinyl-tRNA aminoacylation IEP Enrichment
BP GO:0006720 isoprenoid metabolic process IEP Enrichment
BP GO:0006757 ATP generation from ADP IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008184 glycogen phosphorylase activity IEP Enrichment
BP GO:0008299 isoprenoid biosynthetic process IEP Enrichment
BP GO:0009132 nucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP Enrichment
CC GO:0009507 chloroplast IEP Enrichment
CC GO:0009521 photosystem IEP Enrichment
CC GO:0009523 photosystem II IEP Enrichment
CC GO:0009536 plastid IEP Enrichment
MF GO:0009916 alternative oxidase activity IEP Enrichment
BP GO:0015979 photosynthesis IEP Enrichment
BP GO:0016052 carbohydrate catabolic process IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Enrichment
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Enrichment
MF GO:0016758 hexosyltransferase activity IEP Enrichment
MF GO:0016830 carbon-carbon lyase activity IEP Enrichment
MF GO:0016832 aldehyde-lyase activity IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
BP GO:0046031 ADP metabolic process IEP Enrichment
BP GO:0046939 nucleotide phosphorylation IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
InterPro domains Description Start Stop
IPR014030 Ketoacyl_synth_N 59 296
No external refs found!