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  5. Transcript_contig_57356

Transcript_contig_57356 (57356)


Aliases : 57356

Description : CCB3/YggT [Interproscan].


Gene families : OG_01_0003272 (OrthoFinder) Phylogenetic Tree(s): OG0003272_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_57356
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020912.28 tig00020912_g15801.t1 Photosynthesis.photophosphorylation.cytochrome b6/f... 0.01 OrthoFinder
lcl|BLLF01003881.1_cds_GFH28445.1_22922 HaLaN_26936, GFH28445 CCB3/YggT [Interproscan]. 0.01 OrthoFinder
lcl|LHPG02000015.1_cds_PRW34048.1_2828 PRW34048 CPLD43 required for cyt b6 assembly 0.02 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004518 nuclease activity IEP Enrichment
MF GO:0004527 exonuclease activity IEP Enrichment
MF GO:0004620 phospholipase activity IEP Enrichment
MF GO:0005542 folic acid binding IEP Enrichment
MF GO:0008408 3'-5' exonuclease activity IEP Enrichment
MF GO:0016298 lipase activity IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
MF GO:0031406 carboxylic acid binding IEP Enrichment
MF GO:0033218 amide binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
MF GO:0043177 organic acid binding IEP Enrichment
MF GO:0072341 modified amino acid binding IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR003425 CCB3/YggT 103 172
No external refs found!