Transcript_contig_57349 (57349)


Aliases : 57349

Description : Glycoside hydrolase family 18, catalytic domain [Interproscan].


Gene families : OG_01_0000014 (OrthoFinder) Phylogenetic Tree(s): OG0000014_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_57349
Cluster HCCA: Cluster_160

Target Alias Description ECC score Gene Family Method Actions
Cz08g16120.t1 No alias Protein kinase domain [Interproscan]. 0.02 OrthoFinder
OT_01G04290.1 No alias Protein kinase domain [Interproscan]. 0.01 OrthoFinder
OT_04G00120.1 No alias Protein kinase domain [Interproscan]. 0.02 OrthoFinder
Vocar.0025s0146.1 32898295 Protein kinase domain [Interproscan]. 0.02 OrthoFinder
Vocar.0029s0104.1 32887332 Protein kinase domain [Interproscan]. 0.02 OrthoFinder
XM_003061138.1 MicpuC2_48067, 48067 Protein kinase domain; Haspin like kinase domain [Interproscan]. 0.01 OrthoFinder
lcl|BLLF01003044.1_cds_GFH26170.1_20647 HaLaN_24271, GFH26170 Protein kinase domain-containing protein 0.01 OrthoFinder
lcl|LHPG02000003.1_cds_PRW59823.1_6195 PRW59823 Cyclin-dependent kinase 20 isoform X1 0.02 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
CC GO:0005801 cis-Golgi network IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
InterPro domains Description Start Stop
IPR001223 Glyco_hydro18_cat 22 181
No external refs found!