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  5. Transcript_contig_57105

Transcript_contig_57105 (57105)


Aliases : 57105

Description : Vps16, C-terminal; Vps16, N-terminal [Interproscan].


Gene families : OG_01_0002430 (OrthoFinder) Phylogenetic Tree(s): OG0002430_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_57105
Cluster HCCA: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
Cz13g15190.t1 No alias Vps16, C-terminal; Vps16, N-terminal [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm IEA Interproscan
BP GO:0006886 intracellular protein transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint signaling IEP Enrichment
BP GO:0000077 DNA damage checkpoint signaling IEP Enrichment
BP GO:0006401 RNA catabolic process IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
BP GO:0010564 regulation of cell cycle process IEP Enrichment
BP GO:0010948 negative regulation of cell cycle process IEP Enrichment
BP GO:0016579 protein deubiquitination IEP Enrichment
BP GO:0019439 aromatic compound catabolic process IEP Enrichment
CC GO:0030896 checkpoint clamp complex IEP Enrichment
BP GO:0031570 DNA integrity checkpoint signaling IEP Enrichment
CC GO:0032299 ribonuclease H2 complex IEP Enrichment
BP GO:0034655 nucleobase-containing compound catabolic process IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
BP GO:0042770 signal transduction in response to DNA damage IEP Enrichment
BP GO:0044270 cellular nitrogen compound catabolic process IEP Enrichment
BP GO:0045786 negative regulation of cell cycle IEP Enrichment
BP GO:0046700 heterocycle catabolic process IEP Enrichment
BP GO:0048519 negative regulation of biological process IEP Enrichment
BP GO:0048523 negative regulation of cellular process IEP Enrichment
BP GO:0051726 regulation of cell cycle IEP Enrichment
BP GO:0070646 protein modification by small protein removal IEP Enrichment
BP GO:0070647 protein modification by small protein conjugation or removal IEP Enrichment
CC GO:0140535 intracellular protein-containing complex IEP Enrichment
BP GO:1901361 organic cyclic compound catabolic process IEP Enrichment
BP GO:1901987 regulation of cell cycle phase transition IEP Enrichment
BP GO:1901988 negative regulation of cell cycle phase transition IEP Enrichment
InterPro domains Description Start Stop
IPR006926 Vps16_N 2 70
IPR006925 Vps16_C 207 279
IPR006925 Vps16_C 301 487
No external refs found!