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  5. Transcript_contig_56927

Transcript_contig_56927 (56927)


Aliases : 56927

Description : NAD(P)-binding domain [Interproscan].


Gene families : OG_01_0000613 (OrthoFinder) Phylogenetic Tree(s): OG0000613_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_56927
Cluster HCCA: Cluster_174

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000478.28 tig00000478_g1276.t1 Uncharacterized protein At2g34460, chloroplastic... 0.02 OrthoFinder
Cz16g00210.t1 No alias NAD(P)-binding domain [Interproscan]. 0.03 OrthoFinder
Dusal.0178s00011.1 33194015 NAD(P)-binding domain [Interproscan]. 0.03 OrthoFinder
OT_08G04310.1 No alias NAD(P)-binding domain [Interproscan]. 0.02 OrthoFinder
Sro1673_g290310.1 Contig3669.g28360 TIC 62, chloroplastic 0.01 OrthoFinder
Sro2822_g337950.1 Contig609.g7530 TIC 62, chloroplastic 0.01 OrthoFinder
XM_002500975.1 MICPUN_79652, 79652 NAD(P)-binding domain [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01003257.1_cds_GFH26837.1_21314 HaLaN_25055, GFH26837 NAD(P)-bd_dom domain-containing protein 0.03 OrthoFinder
lcl|BLLF01005457.1_cds_GFH31220.1_25697 HaLaN_30214, GFH31220 NAD(P)-bd_dom domain-containing protein 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0004367 glycerol-3-phosphate dehydrogenase [NAD+] activity IEP Enrichment
MF GO:0004421 hydroxymethylglutaryl-CoA synthase activity IEP Enrichment
BP GO:0006072 glycerol-3-phosphate metabolic process IEP Enrichment
BP GO:0006720 isoprenoid metabolic process IEP Enrichment
BP GO:0008299 isoprenoid biosynthetic process IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0046168 glycerol-3-phosphate catabolic process IEP Enrichment
BP GO:0046434 organophosphate catabolic process IEP Enrichment
MF GO:0046912 acyltransferase, acyl groups converted into alkyl on transfer IEP Enrichment
MF GO:0047952 glycerol-3-phosphate dehydrogenase [NAD(P)+] activity IEP Enrichment
MF GO:0051287 NAD binding IEP Enrichment
BP GO:0052646 alditol phosphate metabolic process IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
BP GO:1901136 carbohydrate derivative catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR016040 NAD(P)-bd_dom 88 285
No external refs found!