Transcript_contig_56879 (56879)

Aliases : 56879

Description : Carbohydrate binding module family 20 [Interproscan].

Gene families : OG_01_0000144 (OrthoFinder) Phylogenetic Tree(s): OG0000144_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Transcript_contig_56879
Cluster	HCCA: Cluster_130

Target	Alias	Description	ECC score	Gene Family Method	Actions
XM_002502674.1	MICPUN_59003, 59003	Carbohydrate-binding module family 20 protein	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0030246	carbohydrate binding	None	Extended
MF	GO:0030247	polysaccharide binding	None	Extended
MF	GO:2001070	starch binding	IEA	Interproscan

Type	GO Term	Name	Evidence	Source
CC	GO:0000796	condensin complex	IEP	Enrichment
MF	GO:0003682	chromatin binding	IEP	Enrichment
BP	GO:0006323	DNA packaging	IEP	Enrichment
BP	GO:0006996	organelle organization	IEP	Enrichment
BP	GO:0007076	mitotic chromosome condensation	IEP	Enrichment
BP	GO:0022402	cell cycle process	IEP	Enrichment
BP	GO:0030261	chromosome condensation	IEP	Enrichment
CC	GO:0044815	DNA packaging complex	IEP	Enrichment
BP	GO:0051276	chromosome organization	IEP	Enrichment
BP	GO:0071103	DNA conformation change	IEP	Enrichment
BP	GO:1903047	mitotic cell cycle process	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR002044	CBM_fam20	56	143

External Links

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